The GenePattern Notebook environment for reproducible cancer research

被引:0
|
作者
Reich, Michael M. [1 ]
Tabor, Thorin T. [1 ]
Liefeld, Ted [1 ]
Hill, Barbara [2 ]
Thorvaldsdottir, Helga [2 ]
Mesirov, Jill P. [1 ]
机构
[1] UCSD, La Jolla, CA USA
[2] Broad Inst MIT & Harvard, Cambridge, MA USA
关键词
D O I
10.1158/1538-7445.AM2018-2279
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
2279
引用
收藏
页数:2
相关论文
共 50 条
  • [1] The GenePattern Notebook environment for reproducible cancer research
    Reich, Michael M.
    Tabor, Thorin T.
    Liefeld, Ted
    Hill, Barbara
    Thorvaldsdottir, Helga
    Mesirov, Jill P.
    CANCER RESEARCH, 2019, 79 (13)
  • [2] GenePattern Notebook: an environment for reproducible cancer research
    Reich, Michael M.
    Tabor, Thorin T.
    Liefeld, Ted
    Hill, Barbara
    Thorvaldsdottir, Helga
    Mesirov, Jill P.
    CANCER RESEARCH, 2017, 77
  • [3] GenePattern Notebook: An integrative analytical environment for cancer research
    Reich, Michael M.
    Tabor, Thorin
    Liefeld, Ted
    Juarez, Edwin
    Hill, Barbara
    Thorvaldsdottir, Helga
    Tamayo, Pablo
    Mesirov, Jill P.
    CANCER RESEARCH, 2020, 80 (16)
  • [4] The GenePattern Notebook Environment
    Reich, Michael
    Tabor, Thorin
    Liefeld, Ted
    Thorvaldsdottir, Helga
    Hill, Barbara
    Tamayo, Pablo
    Mesirov, Jill P.
    CELL SYSTEMS, 2017, 5 (02) : 149 - +
  • [5] GenePattern Notebook: An integrative analytical environment for cancer research.
    Reich, Michael M.
    Tabor, Thorin
    Juarez, Edwin
    Wenzel, Alexander
    Liefeld, Ted
    Hill, Barbara
    Eby, David
    Kim, Forrest
    Thorvaldsdottir, Helga
    Tamayo, Pablo
    Mesirov, Jill P.
    CANCER RESEARCH, 2022, 82 (12)
  • [6] GenePattern Notebooks: an integrative analytical environment for cancer research
    Reich, Michael M.
    Tabor, Thorin
    Liefeld, John T.
    Carr, Peter
    Hill, Barbara
    Nazaire, Marc-Danie
    Eby, David
    Thorvaldsdottir, Helga
    Tamayo, Pablo
    Mesirov, Jill P.
    CANCER RESEARCH, 2016, 76
  • [7] The GenePattern ecosystem for cancer bioinformatics
    Reich, Michael M.
    Tabor, Thorin
    Liefeld, John
    Huang, Edwin
    Kim, Forrest
    Mesirov, Jill P.
    CANCER RESEARCH, 2024, 84 (06)
  • [8] Occam: Software Environment for Creating Reproducible Research
    Oliveira, Luis
    Wilkinson, David
    Mosse, Daniel
    Childers, Bruce R.
    2018 IEEE 14TH INTERNATIONAL CONFERENCE ON E-SCIENCE (E-SCIENCE 2018), 2018, : 394 - 395
  • [9] Reproducible Notebook Containers using Application Virtualization
    Ahmad, Raza
    Manne, Naga Nithin
    Malik, Tanu
    2022 IEEE 18TH INTERNATIONAL CONFERENCE ON E-SCIENCE (ESCIENCE 2022), 2022, : 1 - 10
  • [10] Multiverse Notebook: A Notebook Environment for Safe and Efficient Exploration
    Nakamaru, Tomoki
    Sato, Shigeyuki
    COMPANION PROCEEDINGS OF THE 2022 ACM SIGPLAN INTERNATIONAL CONFERENCE ON SYSTEMS, PROGRAMMING, LANGUAGES, AND APPLICATIONS: SOFTWARE FOR HUMANITY, SPLASH COMPANION 2022, 2022, : 7 - 8