Elimination of Cas9-dependent off-targeting of adenine base editor by using TALE to separately guide deaminase to target sites

被引:15
作者
Liu, Yang [1 ,2 ,3 ]
Zhou, Jizeng [4 ]
Lan, Ting [1 ,5 ]
Zhou, Xiaoqing [2 ]
Yang, Yang [4 ]
Li, Chuan [2 ]
Zhang, Quanjun [1 ,6 ,7 ]
Chen, Min [2 ]
Wei, Shu [8 ]
Zheng, Shuwen [2 ]
Cheng, Lingyin [2 ]
Zheng, Yuling [2 ]
Lai, Liangxue [1 ,2 ,6 ,7 ]
Zou, Qingjian [2 ]
机构
[1] Chinese Acad Sci, Guangzhou Inst Biomed & Hlth, Guangdong Hong Kong Stem Cell & Regenerat Med Res, CAS Key Lab Regenerat Biol,Joint Res Lab Stem Cel, Guangzhou, Peoples R China
[2] Wuyi Univ, Sch Biotechnol & Hlth Sci, Guangdong Prov Key Lab Large Anim Models Biomed, Jiangmen, Peoples R China
[3] Univ Sci & Technol China, Sch Life Sci, Hefei, Peoples R China
[4] Guangdong Univ Technol, Sch Biomed & Pharmaceut Sci, Guangzhou, Peoples R China
[5] Univ Chinese Acad Sci, Beijing, Peoples R China
[6] Bioland Lab Guangzhou Regenerat Med & Hlth Guangd, Guangzhou, Peoples R China
[7] Chinese Acad Med Sci 2019RU015, Res Unit Generat Large Anim Dis Models, Guangzhou, Peoples R China
[8] Yunnan Univ, Sch Life Sci, State Key Lab Conservat & Utilizat Bio Resources, Kunming, Yunnan, Peoples R China
基金
中国国家自然科学基金;
关键词
GENOMIC DNA;
D O I
10.1038/s41421-022-00384-4
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
引用
收藏
页数:5
相关论文
共 10 条
[1]   DNA-binding-domain fusions enhance the targeting range and precision of Cas9 [J].
Bolukbasi, Mehmet Fatih ;
Gupta, Ankit ;
Oikemus, Sarah ;
Derr, Alan G. ;
Garber, Manuel ;
Brodsky, Michael H. ;
Zhu, Lihua Julie ;
Wolfe, Scot A. .
NATURE METHODS, 2015, 12 (12) :1150-+
[2]   Improving CRISPR-Cas nuclease specificity using truncated guide RNAs [J].
Fu, Yanfang ;
Sander, Jeffry D. ;
Reyon, Deepak ;
Cascio, Vincent M. ;
Joung, J. Keith .
NATURE BIOTECHNOLOGY, 2014, 32 (03) :279-284
[3]   Programmable base editing of A.T to G.C in genomic DNA without DNA cleavage [J].
Gaudelli, Nicole M. ;
Komor, Alexis C. ;
Rees, Holly A. ;
Packer, Michael S. ;
Badran, Ahmed H. ;
Bryson, David I. ;
Liu, David R. .
NATURE, 2017, 551 (7681) :464-+
[4]   Transcriptome-wide off-target RNA editing induced by CRISPR-guided DNA base editors [J].
Grunewald, Julian ;
Zhou, Ronghao ;
Garcia, Sara P. ;
Iyer, Sowmya ;
Lareau, Caleb A. ;
Aryee, Martin J. ;
Joung, J. Keith .
NATURE, 2019, 569 (7756) :433-+
[5]   High-fidelity CRISPR-Cas9 nucleases with no detectable genome-wide off-target effects [J].
Kleinstiver, Benjamin P. ;
Pattanayak, Vikram ;
Prew, Michelle S. ;
Tsai, Shengdar Q. ;
Nguyen, Nhu T. ;
Zheng, Zongli ;
Joung, J. Keith .
NATURE, 2016, 529 (7587) :490-+
[6]   Programmable editing of a target base in genomic DNA without double-stranded DNA cleavage [J].
Komor, Alexis C. ;
Kim, Yongjoo B. ;
Packer, Michael S. ;
Zuris, John A. ;
Liu, David R. .
NATURE, 2016, 533 (7603) :420-+
[7]   Analysis and minimization of cellular RNA editing by DNA adenine base editors [J].
Rees, Holly A. ;
Wilson, Christopher ;
Doman, Jordan L. ;
Liu, David R. .
SCIENCE ADVANCES, 2019, 5 (05)
[8]   Engineering and optimising deaminase fusions for genome editing [J].
Yang, Luhan ;
Briggs, Adrian W. ;
Chew, Wei Leong ;
Mali, Prashant ;
Guell, Marc ;
Aach, John ;
Goodman, Daniel Bryan ;
Cox, David ;
Kan, Yinan ;
Lesha, Emal ;
Soundararajan, Venkataramanan ;
Zhang, Feng ;
Church, George .
NATURE COMMUNICATIONS, 2016, 7
[9]   Off-target RNA mutation induced by DNA base editing and its elimination by mutagenesis [J].
Zhou, Changyang ;
Sun, Yidi ;
Yan, Rui ;
Liu, Yajing ;
Zuo, Erwei ;
Gu, Chan ;
Han, Linxiao ;
Wei, Yu ;
Hu, Xinde ;
Zeng, Rong ;
Li, Yixue ;
Zhou, Haibo ;
Guo, Fan ;
Yang, Hui .
NATURE, 2019, 571 (7764) :275-+
[10]   Cytosine base editor generates substantial off-target single-nucleotide variants in mouse embryos [J].
Zuo, Erwei ;
Sun, Yidi ;
Wei, Wu ;
Yuan, Tanglong ;
Ying, Wenqin ;
Sun, Hao ;
Yuan, Liyun ;
Steinmetz, Lars M. ;
Li, Yixue ;
Yang, Hui .
SCIENCE, 2019, 364 (6437) :289-+