The Genome of the Fungal Pathogen Verticillium dahliae Reveals Extensive Bacterial to Fungal Gene Transfer

被引:17
|
作者
Shi-Kunne, Xiaoqian [1 ]
van Kooten, Mathijs [1 ]
Depotter, Jasper R. L. [1 ,2 ,3 ]
Thomma, Bart P. H. J. [1 ]
Seidl, Michael F. [1 ,4 ]
机构
[1] Wageningen Univ, Lab Phytopathol, Wageningen, Netherlands
[2] Natl Inst Agr Bot, Dept Crops & Agron, Cambridge, England
[3] Univ Cologne, BioCtr, Bot Inst, Cologne, Germany
[4] Univ Utrecht, Theoret Biol & Bioinformat, Utrecht, Netherlands
来源
GENOME BIOLOGY AND EVOLUTION | 2019年 / 11卷 / 03期
关键词
horizontal gene transfer; Verticillium; fungus; ascomycete; bacteria; DIFFERENTIAL EXPRESSION ANALYSIS; HORIZONTAL GENE; EVOLUTION; VIRULENCE; MECHANISMS; DISCOVERY;
D O I
10.1093/gbe/evz040
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Horizontal gene transfer (HGT) involves the transmission of genetic material between distinct evolutionary lineages and can be an important source of biological innovation. Reports of interkingdom HGT to eukaryotic microbial pathogens have accumulated over recent years. Verticillium dahliae is a notorious plant pathogen that causes vascular wilt disease on hundreds of plant species, resulting in high economic losses every year. Previously, the effector gene Ave1 and a glucosyltransferase-encoding gene were identified as virulence factor-encoding genes that were proposed to be horizontally acquired from a plant and a bacterial donor, respectively. However, to what extent HGT contributed to the overall genome composition of V. dahliae remained elusive. Here, we systematically searched for evidence of interkingdom HGT events in the genome of V. dahliae and provide evidence for extensive horizontal gene acquisition from bacterial origin.
引用
收藏
页码:855 / 868
页数:14
相关论文
共 50 条
  • [21] Gene expression in human fungal pathogen Coccidioides immitis changes as arthroconidia differentiate into spherules and mature
    Viriyakosol, Suganya
    Singhania, Akul
    Fierer, Joshua
    Goldberg, Jonathan
    Kirkland, Theo N.
    Woelk, Christopher H.
    BMC MICROBIOLOGY, 2013, 13
  • [22] Comparative genomics of the wheat fungal pathogen Pyrenophora tritici-repentis reveals chromosomal variations and genome plasticity
    Moolhuijzen, Paula
    See, Pao Theen
    Hane, James K.
    Shi, Gongjun
    Liu, Zhaohui
    Oliver, Richard P.
    Moffat, Caroline S.
    BMC GENOMICS, 2018, 19
  • [23] Horizontal gene transfer drives adaptive colonization of apple trees by the fungal pathogen Valsa mali
    Yin, Zhiyuan
    Zhu, Baitao
    Feng, Hao
    Huang, Lili
    SCIENTIFIC REPORTS, 2016, 6
  • [24] Phylogenomics reveals extensive misidentification of fungal strains from the genus Aspergillus
    Steenwyk, Jacob L.
    Balamurugan, Charu
    Raja, Huzefa A.
    Goncalves, Carla
    Li, Ningxiao
    Martin, Frank
    Berman, Judith
    Oberlies, Nicholas H.
    Gibbons, John G.
    Goldman, Gustavo H.
    Geiser, David M.
    Houbraken, Jos
    Hibbett, David S.
    Rokas, Antonis
    MICROBIOLOGY SPECTRUM, 2024, 12 (04)
  • [25] Comparative genomics reveals cotton-specific virulence factors in flexible genomic regions in Verticillium dahliae and evidence of horizontal gene transfer from Fusarium
    Chen, Jie-Yin
    Liu, Chun
    Gui, Yue-Jing
    Si, Kai-Wei
    Zhang, Dan-Dan
    Wang, Jie
    Short, Dylan P. G.
    Huang, Jin-Qun
    Li, Nan-Yang
    Liang, Yong
    Zhang, Wen-Qi
    Yang, Lin
    Ma, Xue-Feng
    Li, Ting-Gang
    Zhou, Lei
    Wang, Bao-Li
    Bao, Yu-Ming
    Subbarao, Krishna V.
    Zhang, Geng-Yun
    Dai, Xiao-Feng
    NEW PHYTOLOGIST, 2018, 217 (02) : 756 - 770
  • [26] Comparative Genomics Reveals Sources of Genetic Variability in the Asexual Fungal Plant Pathogen Colletotrichum lupini
    Alkemade, Joris A.
    Hohmann, Pierre
    Messmer, Monika M.
    Barraclough, Timothy G.
    MOLECULAR PLANT PATHOLOGY, 2024, 25 (12)
  • [27] Evolution within the fungal genus Verticillium is characterized by chromosomal rearrangement and gene loss
    Shi-Kunne, Xiaoqian
    Faino, Luigi
    van den Berg, Grardy C. M.
    Thomma, Bart P. H. J.
    Seidl, Michael F.
    ENVIRONMENTAL MICROBIOLOGY, 2018, 20 (04) : 1362 - 1373
  • [28] VdPAT1 encoding a pantothenate transporter protein is required for fungal growth, mycelial penetration and pathogenicity of Verticillium dahliae
    Kamau, Stephen Mwangi
    Li, Yongtai
    Sun, Tiange
    Liu, Feng
    Zhu, Qian-Hao
    Zhang, Xinyu
    Sun, Jie
    Li, Yanjun
    FRONTIERS IN MICROBIOLOGY, 2025, 15
  • [29] Assignment of a dubious gene cluster to melanin biosynthesis in the tomato fungal pathogen Cladosporium fulvum
    Griffiths, Scott A.
    Cox, Russell J.
    Overdijk, Elysa J. R.
    Mesarich, Carl H.
    Saccomanno, Benedetta
    Lazarus, Colin M.
    de Wit, Pierre J. G. M.
    Collemare, Jerome
    PLOS ONE, 2018, 13 (12):
  • [30] A homologue of a gene implicated in the virulence of human fungal diseases is present in a plant fungal pathogen and is expressed during infection
    Hall, N
    Keon, JPR
    Hargreaves, JA
    PHYSIOLOGICAL AND MOLECULAR PLANT PATHOLOGY, 1999, 55 (01) : 69 - 73