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Crystal Structure of Metallo DNA Duplex Containing Consecutive Watson-Crick-like T-HgII-T Base Pairs**
被引:123
作者:
Kondo, Jiro
[1
]
Yamada, Tom
[1
]
Hirose, Chika
[1
]
Okamoto, Itaru
[2
]
Tanaka, Yoshiyuki
[3
]
Ono, Akira
[2
]
机构:
[1] Sophia Univ, Dept Mat & Life Sci, Fac Sci & Technol, Chiyoda Ku, Tokyo 1028554, Japan
[2] Kanagawa Univ, Dept Mat & Life Chem, Fac Engn, Yokohama, Kanagawa 2218686, Japan
[3] Tohoku Univ, Lab Mol Transformat, Grad Sch Pharmaceut Sci, Sendai, Miyagi 9808578, Japan
关键词:
DNA;
helical structures;
mercury;
metalation;
structure elucidation;
DOUBLE-STRANDED POLYNUCLEOTIDES;
NUCLEIC-ACIDS;
REVERSIBLE REACTION;
ARTIFICIAL DNA;
CROSS-LINKING;
RNA DUPLEXES;
B-DNA;
MERCURY;
BINDING;
COMPLEXES;
D O I:
10.1002/anie.201309066
中图分类号:
O6 [化学];
学科分类号:
0703 ;
摘要:
The metallo DNA duplex containing mercury-mediated T-T base pairs is an attractive biomacromolecular nanomaterial which can be applied to nanodevices such as ion sensors. Reported herein is the first crystal structure of a B-form DNA duplex containing two consecutive T-Hg-II-T base pairs. The Hg-II ion occupies the center between two T residues. The N3-Hg-II bond distance is 2.0 angstrom. The relatively short Hg-II-Hg-II distance (3.3 angstrom) observed in consecutive T-Hg-II-T base pairs suggests that the metallophilic attraction could exist between them and may stabilize the B-form double helix. To support this, the DNA duplex is largely distorted and adopts an unusual nonhelical conformation in the absence of Hg-II. The structure of the metallo DNA duplex itself and the Hg-II-induced structural switching from the nonhelical form to the B-form provide the basis for structure-based design of metal-conjugated nucleic acid nanomaterials.
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页码:2385 / 2388
页数:4
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