Accurate schemes for calculation of thermodynamic properties of liquid mixtures from molecular dynamics simulations

被引:48
作者
Caro, Miguel A. [1 ,2 ]
Laurila, Tomi [2 ]
Lopez-Acevedo, Olga [1 ]
机构
[1] Aalto Univ, Dept Appl Phys, COMP Ctr Excellence Computat Nanosci, Espoo, Finland
[2] Aalto Univ, Dept Elect Engn & Automat, Espoo, Finland
基金
芬兰科学院;
关键词
HARD-SPHERES; FORCE-FIELD; FREE-ENERGY; WATER; ENTROPY; ACETONITRILE; ALCOHOL; MODEL; N; N-DIMETHYLFORMAMIDE; TEMPERATURE;
D O I
10.1063/1.4973001
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
We explore different schemes for improved accuracy of entropy calculations in aqueous liquid mixtures from molecular dynamics (MD) simulations. We build upon the two-phase thermodynamic (2PT) model of Lin et al. [J. Chem. Phys. 119, 11792 (2003)] and explore new ways to obtain the partition between the gas-like and solid-like parts of the density of states, as well as the effect of the chosen ideal "combinatorial" entropy of mixing, both of which have a large impact on the results. We also propose a first-order correction to the issue of kinetic energy transfer between degrees of freedom (DoF). This problem arises when the effective temperatures of translational, rotational, and vibrational DoF are not equal, either due to poor equilibration or reduced system size/time sampling, which are typical problems for ab initio MD. The new scheme enables improved convergence of the results with respect to configurational sampling, by up to one order of magnitude, for short MD runs. To ensure a meaningful assessment, we perform MD simulations of liquid mixtures of water with several other molecules of varying sizes: methanol, acetonitrile, N, N-dimethylformamide, and n-butanol. Our analysis shows that results in excellent agreement with experiment can be obtained with little computational effort for some systems. However, the ability of the 2PT method to succeed in these calculations is strongly influenced by the choice of force field, the fluidicity (hard-sphere) formalism employed to obtain the solid/gas partition, and the assumed combinatorial entropy of mixing. We tested two popular force fields, GAFF and OPLS with SPC/E water. For the mixtures studied, the GAFF force field seems to perform as a slightly better "all-around" force field when compared to OPLS+SPC/E. (C) 2016 Author(s).
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页数:11
相关论文
共 33 条
[1]   EVALUATION OF THE EXCESS GIBBS ENERGY OF MIXING IN BINARY ALCOHOL-WATER MIXTURES FROM THE LIQUID-LIQUID PARTITION DATA IN ELECTROLYTE-WATER-ALCOHOL SYSTEMS [J].
APELBLAT, A .
BERICHTE DER BUNSEN-GESELLSCHAFT-PHYSICAL CHEMISTRY CHEMICAL PHYSICS, 1990, 94 (10) :1128-1134
[2]   THE MISSING TERM IN EFFECTIVE PAIR POTENTIALS [J].
BERENDSEN, HJC ;
GRIGERA, JR ;
STRAATSMA, TP .
JOURNAL OF PHYSICAL CHEMISTRY, 1987, 91 (24) :6269-6271
[3]   MOLECULAR-DYNAMICS WITH COUPLING TO AN EXTERNAL BATH [J].
BERENDSEN, HJC ;
POSTMA, JPM ;
VANGUNSTEREN, WF ;
DINOLA, A ;
HAAK, JR .
JOURNAL OF CHEMICAL PHYSICS, 1984, 81 (08) :3684-3690
[4]   THERMODYNAMICS AND QUANTUM CORRECTIONS FROM MOLECULAR-DYNAMICS FOR LIQUID WATER [J].
BERENS, PH ;
MACKAY, DHJ ;
WHITE, GM ;
WILSON, KR .
JOURNAL OF CHEMICAL PHYSICS, 1983, 79 (05) :2375-2389
[5]   Densities and viscosities of (N,N-dimethylformamide plus water) at atmospheric pressure from (283.15 to 353.15) K [J].
Bernal-Garcia, J. Manuel ;
Guzman-Lopez, Adriana ;
Cabrales-Torres, Alberto ;
Estrada-Baltazar, Alejandro ;
Iglesias-Silva, Gustavo A. .
JOURNAL OF CHEMICAL AND ENGINEERING DATA, 2008, 53 (04) :1024-1027
[6]   Canonical sampling through velocity rescaling [J].
Bussi, Giovanni ;
Donadio, Davide ;
Parrinello, Michele .
JOURNAL OF CHEMICAL PHYSICS, 2007, 126 (01)
[7]   Force Field Benchmark of Organic Liquids: Density, Enthalpy of Vaporization, Heat Capacities, Surface Tension, Isothermal Compressibility, Volumetric Expansion Coefficient, and Dielectric Constant [J].
Caleman, Carl ;
van Maaren, Paul J. ;
Hong, Minyan ;
Hub, Jochen S. ;
Costa, Luciano T. ;
van der Spoel, David .
JOURNAL OF CHEMICAL THEORY AND COMPUTATION, 2012, 8 (01) :61-74
[8]  
Chapman S, 1970, The Mathematical Theory of Non-uniform Gases
[9]   THERMODYNAMIC PROPERTIES OF ORGANIC OXYGEN COMPOUNDS .16. BUTYL ALCOHOL [J].
COUNSELL, JF ;
HALES, JL ;
MARTIN, JF .
TRANSACTIONS OF THE FARADAY SOCIETY, 1965, 61 (513P) :1869-&