Reaction Mechanism of the Bicopper Enzyme Peptidylglycine α-Hydroxylating Monooxygenase

被引:28
作者
Abad, Enrique [1 ]
Rommel, Judith B. [1 ]
Kaestner, Johannes [1 ]
机构
[1] Univ Stuttgart, Inst Theoret Chem, Computat Biochem Grp, D-70569 Stuttgart, Germany
关键词
Computer Modeling; Copper; Enzyme Catalysis; Metalloproteins; Post-translational Modification; Kinetic Isotope Effects; PHM; QM; MM Simulation; Quantum Tunneling; Reaction Mechanism; DOPAMINE BETA-MONOOXYGENASE; AMIDATING ENZYME; MOLECULAR-DYNAMICS; MONONUCLEAR COPPER; ELECTRON-TRANSFER; ACTIVE-SITE; BASIS-SETS; CATALYTIC MECHANISM; POTENTIAL SURFACES; QM/MM SIMULATIONS;
D O I
10.1074/jbc.M114.558494
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Background: Peptidylglycine -hydroxylating monooxygenase catalyzes the generation of C-terminal carboxamides of peptide hormones, neurotransmitters, and growth factors for biological activation. Results: We compare several possible reaction mechanisms by means of quantum mechanics/molecular mechanics calculations. Conclusion: Our results suggest that the most likely abstracting species is [CuOOH](2+). Significance: Our computational study proposes a new mechanism, which explains the experimental observations. Peptidylglycine -hydroxylating monooxygenase is a noninteracting bicopper enzyme that stereospecifically hydroxylates the terminal glycine of small peptides for its later amidation. Neuroendocrine messengers, such as oxytocin, rely on the biological activity of this enzyme. Each catalytic turnover requires one oxygen molecule, two protons from the solvent, and two electrons. Despite this enzyme having been widely studied, a consensus on the reaction mechanism has not yet been found. Experiments and theoretical studies favor a pro-S abstraction of a hydrogen atom followed by the rebinding of an OH group. However, several hydrogen-abstracting species have been postulated; because two protons are consumed during the reaction, several protonation states are available. An electron transfer between the copper atoms could play a crucial role for the catalysis as well. This leads to six possible abstracting species. In this study, we compare them on equal footing. We perform quantum mechanics/molecular mechanics calculations, considering the glycine hydrogen abstraction. Our results suggest that the most likely mechanism is a protonation of the abstracting species before the hydrogen abstraction and another protonation as well as a reduction before OH rebinding.
引用
收藏
页码:13726 / 13738
页数:13
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