Thaumatin-Like Protein (TLP) Gene Family in Barley: Genome-Wide Exploration and Expression Analysis during Germination

被引:25
|
作者
Iqbal, Irfan [1 ]
Tripathi, Rajiv Kumar [1 ,2 ]
Wilkins, Olivia [1 ,2 ]
Singh, Jaswinder [1 ]
机构
[1] McGill Univ, Plant Sci Dept, 21111 Lakeshore Rd, Quebec City, PQ H9X 3V9, Canada
[2] Univ Manitoba, Dept Biol Sci, Winnipeg, MB R3T 2N2, Canada
基金
加拿大自然科学与工程研究理事会;
关键词
barley; cereals; thaumatin like-proteins; phylogenetics; expression analysis; OVEREXPRESSION; RESISTANCE; STRESS; FRUIT;
D O I
10.3390/genes11091080
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Thaumatin-like Proteins (TLPs) are known to play a vital role in plant defense, developmental processes and seed germination. We identified 19 TLP genes from the reference genome of barley and 37, 28 and 35 TLP genes from rice, Brachypodium and sorghum genomes, respectively. Comparative phylogenetic analysis classified the TLP family into nine groups. Localized gene duplications with diverse exon/intron structures contributed to the expansion of the TLP gene family in cereals. Most of the barley TLPs were localized on chromosome 5H. The spatiotemporal expression pattern of HvTLP genes indicated their predominant expression in the embryo, developing grains, root and shoot tissues. Differential expression of HvTLP14, HvTLP17 and HvTLP18 in the malting variety (Morex) over 16-96 h of grain germination revealed their possible role in malting. This study provides a description of the TLP gene family in barley and their possible involvement in seed germination and the malting process.
引用
收藏
页码:1 / 14
页数:14
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