Comparison of bacterial community structure in coastal and offshore waters of the Bay of Bengal, India

被引:16
作者
Jasna, Vijayan [1 ,2 ]
Nathan, Vinod Kumar [1 ,3 ]
Parvathi, Ammini [1 ]
机构
[1] CSIR, Natl Inst Oceanog, Reg Ctr, Dr Salim Ali Rd,Post Box 1913, Kochi 682018, Kerala, India
[2] Pukyong Natl Univ, Coll Fisheries Sci, Dept Aquat Life Med, Busan, South Korea
[3] SASTRA Deemed Univ, Sch Chem & Biotechnol, Thanjavur 613401, Tamil Nadu, India
关键词
Bacterial diversity; Bay of Bengal; Next generation sequencing; Proteobacteria; Minor phyla; GULF-OF-MEXICO; PACIFIC-OCEAN; AUTOTROPHIC PICOPLANKTON; MICROBIAL COMMUNITIES; ARABIAN SEA; DIVERSITY; DYNAMICS; PROCHLOROCOCCUS; ABUNDANCE; SEDIMENTS;
D O I
10.1016/j.rsma.2020.101414
中图分类号
Q14 [生态学(生物生态学)];
学科分类号
071012 ; 0713 ;
摘要
Bacterial community structure was analysed from the coastal and offshore surface waters of the Bay of Bengal (BoB) using of Next Generation Sequencing (NGS) approach. Taxonomic richness was high in the offshore waters compared to the coastal waters. Analysis of sequence data revealed that both the offshore and coastal waters in our study were dominated by Proteobacteria (67.14% and 61.91%, respectively). The most dominant genera in the coastal waters were Synechococcus, Erythrobacter, Psychrobacter while Prochlorococcus, and Vibrio were dominant in the offshore waters. Interestingly, the distribution of minor phyla was distinctly different in coastal and offshore environments. Fusobacteria, Synergistetes, Fibrobacteres, Spirochaetes, Gemmatimonadetes, Chlorobi, Chlamydiae, and Armatimonadetes were the minor phyla (6.84%) present in offshore waters. The metabolic predictions of the bacterial communities revealed distinctly different activities in the coastal and offshore water samples, which could be attributed to the differences in the physico-chemical conditions and substrate availability. Major functions included sulfate reduction, oxalic acid degradation, dehalogenation, nitrite reduction, ammonia oxidation, nitrogen fixation, xylan degradation, and aromatic hydrocarbons degradation. (C) 2020 Elsevier B.V. All rights reserved.
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页数:9
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