Global genetic regulatory networks controlling hematopoietic cell fates

被引:24
作者
Loose, Matthew
Patient, Roger [1 ]
机构
[1] Univ Oxford, Weatherall Inst Mol Med, John Radcliffe Hosp, Oxford OX3 9DS, England
[2] Univ Nottingham, Inst Genet, Queens Med Ctr, Nottingham NG7 2RD, England
基金
英国医学研究理事会;
关键词
cross-antagonism; forward momentum; genetic regulatory networks; hematopoiesis; multilineage priming; signaling; transcription factors;
D O I
10.1097/01.moh.0000231419.15654.7f
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Purpose of review The gene expression profile of a cell is a consequence of transcription factor activities, which, in turn, are controlled by extra-cellular signals. The relationships between all these regulators constitute a genetic regulatory network, which can be used to predict the behavior of the cell in changing environments. We outline the progress being made to identify Genetic Regulatory Networks for hematopoiesis, using gene-by-gene approaches or emerging genomic technologies. Recent findings The construction of genetic regulatory networks for single and multicellular organisms has inspired the building of genetic regulatory networks for erythropoiesis and B-cell differentiation. genetic regulatory networks are 'scale-free', whereby some genes have many connections while others have very few. The well connected genes, or hubs, correspond to master regulators of the networks, acting to integrate signals and control the sequential passage of the cells through the differentiation process. Lineage decisions are governed by cross-antagonism between two hubs. Large datasets from genome-wide analyses support the concept of multilineage priming and will increasingly refine the network topologies. Summary As the underlying genetic regulatory networks for hematopoiesis continue to emerge, the program for lineage choice and differentiation will be revealed. More large-scale datasets identifying network components are needed alongside continued gene-by-gene analyses.
引用
收藏
页码:229 / 236
页数:8
相关论文
共 66 条
  • [41] A network model for the control of the differentiation process in Th cells
    Mendoza, Luis
    [J]. BIOSYSTEMS, 2006, 84 (02) : 101 - 114
  • [42] Non-coding RNAs in Ciona intestinalis
    Missal, K
    Rose, D
    Stadler, PF
    [J]. BIOINFORMATICS, 2005, 21 : 77 - 78
  • [43] Identification of JAK/STAT signalling components by genome-wide RNA interference
    Müller, P
    Kuttenkeuler, D
    Gesellchen, V
    Zeidler, MP
    Boutros, M
    [J]. NATURE, 2005, 436 (7052) : 871 - 875
  • [44] Dynamic regulation of PU.1 expression in multipotent hematopoietic progenitors
    Nutt, SL
    Metcalf, D
    D' Amico, A
    Polli, M
    Wu, L
    [J]. JOURNAL OF EXPERIMENTAL MEDICINE, 2005, 201 (02) : 221 - 231
  • [45] A minigene containing four discrete cis elements recapitulates GATA-1 gene expression in vivo
    Ohneda, K
    Shimizu, R
    Nishimura, S
    Muraosa, Y
    Takahashi, S
    Engel, JD
    Yamamoto, M
    [J]. GENES TO CELLS, 2002, 7 (12) : 1243 - 1254
  • [46] AML1, the target of multiple chromosomal translocations in human leukemia, is essential for normal fetal liver hematopoiesis
    Okuda, T
    vanDeursen, J
    Hiebert, SW
    Grosveld, G
    Downing, JR
    [J]. CELL, 1996, 84 (02) : 321 - 330
  • [47] Scl is required for dorsal aorta as well as blood formation in zebrafish embryos
    Patterson, LJ
    Gering, M
    Patient, R
    [J]. BLOOD, 2005, 105 (09) : 3502 - 3511
  • [48] Interplay of Pu.1 and gatal determines myelo-erythroid progenitor cell fate in zebrafish
    Rhodes, J
    Hagen, A
    Hsu, K
    Deng, M
    Liu, TX
    Look, AT
    Kanki, JP
    [J]. DEVELOPMENTAL CELL, 2005, 8 (01) : 97 - 108
  • [49] ABSENCE OF YOLK-SAC HEMATOPOIESIS FROM MICE WITH A TARGETED DISRUPTION OF THE SCL GENE
    ROBB, L
    LYONS, I
    LI, RL
    HARTLEY, L
    KONTGEN, F
    HARVEY, RP
    METCALF, D
    BEGLEY, CG
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1995, 92 (15) : 7075 - 7079
  • [50] RBPjκ-dependent Notch function regulates Gata2 and is essential for the formation of intra-embryonic hematopoietic cells
    Robert-Moreno, A
    Espinosa, L
    de la Pompa, JL
    Bigas, A
    [J]. DEVELOPMENT, 2005, 132 (05): : 1117 - 1126