Characterization of Novel Lytic Bacteriophages of Achromobacter marplantensis Isolated from a Pneumonia Patient

被引:7
作者
Chan, Hiu Tat [1 ,2 ]
Ku, Heng [3 ]
Low, Ying Ping [2 ]
Batinovic, Steven [1 ]
Kabwe, Mwila [3 ]
Petrovski, Steve [1 ]
Tucci, Joseph [3 ]
机构
[1] La Trobe Univ, Dept Physiol Anat & Microbiol, Bundoora, Vic 3083, Australia
[2] Royal Melbourne Hosp, Dept Microbiol, Melbourne, Vic 3000, Australia
[3] La Trobe Univ, Dept Pharm & Biomed Sci, La Trobe Inst Mol Sci, Bendigo, Vic 3552, Australia
来源
VIRUSES-BASEL | 2020年 / 12卷 / 10期
关键词
bacteriophage; Achromobacter marplatensis; cystic fibrosis; pneumonia; COMPLETE GENOME SEQUENCE; CYSTIC-FIBROSIS PATIENTS; XYLOSOXIDANS; PREVALENCE; OUTCOMES; REVEALS; LINEAGE; SEARCH; PHAGES; GENES;
D O I
10.3390/v12101138
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Achromobacter spp. are becoming increasingly associated with lung infections in patients suffering from cystic fibrosis (CF). A. marplatensis, which is closely related to A. xylosoxidans, has been isolated from the lungs of CF patients and other human infections. This article describes the isolation, morphology and characterization of two lytic bacteriophages specific for an A. marplatensis strain isolated from a pneumonia patient. This host strain was the causal agent of hospital acquired pneumonia-the first clinical report of such an occurrence. Full genome sequencing revealed bacteriophage genomes ranging in size from 45901 to 46,328 bp. Transmission electron microscopy revealed that the two bacteriophages AMA1 and AMA2 belonged to the Siphoviridae family. Host range analysis showed that their host range did not extend to A. xylosoxidans. The possibility exists for future testing of such bacteriophages in the control of Achromobacter infections such as those seen in CF and other infections of the lungs. The incidence of antibiotic resistance in this genus highlights the importance of seeking adjuncts and alternatives in CF and other lung infections.
引用
收藏
页数:14
相关论文
共 77 条
  • [61] Clinical Outcomes Associated with Achromobacter Species Infection in Patients with Cystic Fibrosis
    Somayaji, Ranjani
    Stanojevic, Sanja
    Tullis, D. Elizabeth
    Stephenson, Anne L.
    Ratjen, Felix
    Waters, Valerie
    [J]. ANNALS OF THE AMERICAN THORACIC SOCIETY, 2017, 14 (09) : 1412 - 1418
  • [62] A Multilocus Sequence Typing Scheme Implies Population Structure and Reveals Several Putative Novel Achromobacter Species
    Spilker, Theodore
    Vandamme, Peter
    LiPuma, John J.
    [J]. JOURNAL OF CLINICAL MICROBIOLOGY, 2012, 50 (09) : 3010 - 3015
  • [63] The sequence manipulation suite: Java']JavaScript programs for analyzing and formatting protein and DNA sequences
    Stothard, P
    [J]. BIOTECHNIQUES, 2000, 28 (06) : 1102 - +
  • [64] Achromobacter Respiratory Infections
    Swenson, Colin E.
    Sadikot, Ruxana T.
    [J]. ANNALS OF THE AMERICAN THORACIC SOCIETY, 2015, 12 (02) : 252 - 258
  • [65] Complete Genome Sequence of the Novel Giant Pseudomonas Phage PaBG
    Sykilinda, Nina N.
    Bondar, Alexander A.
    Gorshkova, Anna S.
    Kurochkina, Lidia P.
    Kulikov, Eugene E.
    Shneider, Mikhail M.
    Kadykov, Vassily A.
    Solovjeva, Natalia, V
    Kabilov, Marsel R.
    Mesyanzhinov, Vadim V.
    Vlassov, Valentin V.
    Drukker, Valentin V.
    Miroshnikov, Konstantin A.
    [J]. GENOME ANNOUNCEMENTS, 2014, 2 (01)
  • [66] Isolation and characterization of Novosphingobium sp strain MT1, a dominant polychlorophenol-degrading strain in a groundwater bioremediation system
    Tiirola, MA
    Männistö, MK
    Puhakka, JA
    Kulomaa, MS
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2002, 68 (01) : 173 - 180
  • [67] Investigating deep phylogenetic relationships among cyanobacteria and plastids by small submit rRNA sequence analysis
    Turner, S
    Pryer, KM
    Miao, VPW
    Palmer, JD
    [J]. JOURNAL OF EUKARYOTIC MICROBIOLOGY, 1999, 46 (04) : 327 - 338
  • [68] Reclassification of Achromobacter spiritinus Vandamme et al. 2013 as a later heterotypic synonym of Achromobacter marplatensis Gomila et al. 2011
    Vandamme, Peter A.
    Peeters, Charlotte
    Cnockaert, Margo
    Gomila, Margarita
    Moore, Edward R. B.
    Spilker, Theodore
    LiPuma, John J.
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2016, 66 : 1641 - 1644
  • [69] ENDOPHTHALMITIS CAUSED BY ACHROMOBACTER XYLOSOXIDANS AFTER CATARACT SURGERY
    Villegas, Victor M.
    Emanuelli, Andres
    Flynn, Harry W., Jr.
    Berrocal, Audina M.
    Miller, Darlene
    Kao, Andrew A.
    Dubovy, Sander R.
    Alfonso, Eduardo
    [J]. RETINA-THE JOURNAL OF RETINAL AND VITREOUS DISEASES, 2014, 34 (03): : 583 - 586
  • [70] Molecular Characterization of Podoviral Bacteriophages Virulent for Clostridium perfringens and Their Comparison with Members of the Picovirinae
    Volozhantsev, Nikolay V.
    Oakley, Brian B.
    Morales, Cesar A.
    Verevkin, Vladimir V.
    Bannov, Vasily A.
    Krasilnikova, Valentina M.
    Popova, Anastasia V.
    Zhilenkov, Eugeni L.
    Garrish, Johnna K.
    Schegg, Kathleen M.
    Woolsey, Rebekah
    Quilici, David R.
    Line, J. Eric
    Hiett, Kelli L.
    Siragusa, Gregory R.
    Svetoch, Edward A.
    Seal, Bruce S.
    [J]. PLOS ONE, 2012, 7 (05):