Strong functional stability of soil microbial communities under semiarid Mediterranean conditions and subjected to long-term shifts in baseline precipitation

被引:109
作者
Curie Yuste, J. [1 ,2 ]
Fernandez-Gonzalez, A. J. [3 ]
Fernandez-Lopez, M. [3 ]
Ogaya, R. [2 ,4 ]
Penuelas, J. [2 ,4 ]
Sardans, J. [2 ,4 ]
Lloret, F. [2 ]
机构
[1] CSIC, MNCN, E-28006 Madrid, Spain
[2] CREAF, E-08193 Barcelona, Spain
[3] CSIC, EEZ, E-18008 Granada, Spain
[4] CSIC, Global Ecol Unit CREAF CEAB CSIC UAB, E-08193 Barcelona, Spain
关键词
Functional stability; CO2; Adaptation; Soil bacterial communities; Diversity; Mediterranean climate; Extreme events; HOLM OAK FOREST; PLANT DIVERSITY; ENZYME-ACTIVITY; CLIMATE-CHANGE; TEMPERATURE; MICROORGANISMS; DECOMPOSITION; RESPONSES; RAINFALL; BIOMASS;
D O I
10.1016/j.soilbio.2013.10.045
中图分类号
S15 [土壤学];
学科分类号
0903 ; 090301 ;
摘要
We investigated the effect of soil microclimate on the structure and functioning of soil microbial communities in a Mediterranean Holm-oak forest subjected to 10 years of partial rain exclusion manipulations, simulating average drought conditions expected in Mediterranean areas for the following decades. We applied a high throughput DNA pyrosequencing technique coupled to parallel measurements of microbial respiration (R-H) and temperature sensitivity of microbial respiration (Q(10)). Some consistent changes in the structure of bacterial communities suggest a slow process of community shifts parallel to the trend towards oligotrophy in response to long-term droughts. However, the structure of bacterial communities was mainly determined by short-term environmental fluctuations associated with sampling date (winter, spring and summer) rather than long-term (10 years) shifts in baseline precipitation. Moreover, long-term drought did not exert any chronic effect on the functioning of soil microbial communities (R-H and Q(10)), emphasizing the functional stability of these communities to this long-term but mild shifts in water availability. We hypothesize that the particular conditions of the Mediterranean climate with strong seasonal shifts in both temperature and soil water availability but also characterized by very extreme environmental conditions during summer, was acting as a strong force in community assembling, selecting phenotypes adapted to the semiarid conditions characterizing Mediterranean ecosystems. Relations of climate with the phylogenetic structure and overall diversity of the communities as well as the distribution of the individual responses of different lineages (genera) to climate confirmed our hypotheses, evidencing communities dominated by thermotolerant and drought-tolerant phenotypes. (C) 2013 Elsevier Ltd. All rights reserved.
引用
收藏
页码:223 / 233
页数:11
相关论文
共 73 条
[1]   Microbial diversity and the genetic nature of microbial species [J].
Achtman, Mark ;
Wagner, Michael .
NATURE REVIEWS MICROBIOLOGY, 2008, 6 (06) :431-440
[2]   PCR-induced sequence artifacts and bias: Insights from comparison of two 16S rRNA clone libraries constructed from the same sample [J].
Acinas, SG ;
Sarma-Rupavtarm, R ;
Klepac-Ceraj, V ;
Polz, MF .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (12) :8966-8969
[3]   Tag-encoded pyrosequencing analysis of bacterial diversity in a single soil type as affected by management and land use [J].
Acosta-Martinez, V. ;
Dowd, S. ;
Sun, Y. ;
Allen, V. .
SOIL BIOLOGY & BIOCHEMISTRY, 2008, 40 (11) :2762-2770
[4]   AEROBIC BIODEGRADATION POTENTIAL OF SUBSURFACE MICROORGANISMS FROM A JET FUEL-CONTAMINATED AQUIFER [J].
AELION, CM ;
BRADLEY, PM .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1991, 57 (01) :57-63
[5]   The freezer defrosting: global warming and litter decomposition rates in cold biomes [J].
Aerts, R. .
JOURNAL OF ECOLOGY, 2006, 94 (04) :713-724
[6]   Resistance, resilience, and redundancy in microbial communities [J].
Allison, Steven D. ;
Martiny, Jennifer B. H. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 :11512-11519
[7]   Seasonal soil and leaf CO2 exchange rates in a Mediterranean holm oak forest and their responses to drought conditions [J].
Asensio, Dolores ;
Penuelas, Josep ;
Ogaya, Roma ;
Llusia, Joan .
ATMOSPHERIC ENVIRONMENT, 2007, 41 (11) :2447-2455
[8]   Litter VOCs induce changes in soil microbial biomass C and N and largely increase soil CO2 efflux [J].
Asensio, Dolores ;
Curiel Yuste, Jorge ;
Mattana, Stefania ;
Ribas, Angela ;
Llusia, Joan ;
Penuelas, Josep .
PLANT AND SOIL, 2012, 360 (1-2) :163-174
[9]   Review and re-analysis of domain-specific 16S primers [J].
Baker, GC ;
Smith, JJ ;
Cowan, DA .
JOURNAL OF MICROBIOLOGICAL METHODS, 2003, 55 (03) :541-555
[10]   Investigating biological control over soil carbon temperature sensitivity [J].
Balser, Teri C. ;
Wixon, Devin L. .
GLOBAL CHANGE BIOLOGY, 2009, 15 (12) :2935-2949