On the Interaction between Deprotonated Cytosine [C(-H)]-and Ba2+: Infrared Multiphoton Spectroscopy and Dynamics

被引:4
|
作者
Cruz-Ortiz, Andres F. [1 ,2 ,3 ]
Taccone, Martin I. [1 ,2 ,3 ]
Maitre, Philippe [4 ]
Rossa, Maximiliano [1 ,2 ,3 ]
Pino, Gustavo A. [1 ,2 ,3 ]
机构
[1] UNC, CONICET, INFIQC, RA-5000 Cordoba, Argentina
[2] Univ Nacl Cordoba, Fac Ciencias Quim, Dept Fisicoquim, Ciudad Univ,X5000HUA, Cordoba, Argentina
[3] Univ Nacl Cordoba, Ctr Laser Ciencias Moleculares, Ciudad Univ,X5000HUA, Cordoba, Argentina
[4] Univ Paris Saclay, CNRS, Inst Chim Phys, F-91405 Orsay, France
基金
欧盟地平线“2020”;
关键词
density functional calculations; DNA-bases; ion spectroscopy; mass spectrometry; metal cations interactions; GAS-PHASE STRUCTURE; IRMPD ACTION SPECTROSCOPY; I-MOTIF; MOLECULAR-STRUCTURE; EXCITED-STATES; NUCLEIC-ACIDS; LEAD(II) IONS; WATSON-CRICK; DISSOCIATION; COMPLEXES;
D O I
10.1002/cphc.202000696
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Gas-phase interactions between Ba(2+)and deprotonated cytosine (C(-H)) were studied in [C(-H)Ba](+)and [C(-H)BaC](+)complexes by IRMPD spectroscopy coupled to tandem mass-spectrometry in combination with DFT calculations. For the [C(-H)BaC](+)complex only one [C((-H))KAN1O-Ba-C-anti](+)isomer was found, although the presence of another structure cannot be excluded. This isomer features a central tetracoordinated Ba(2+)that simultaneously interacts with keto-amino [C(-H)](-)deprotonated on N1 and neutral keto-amino C. Both moieties are in different planes as a consequence of an additional NH horizontal ellipsis O=C hydrogen bond between C and [C(-H)](-). A sequential IRMPD dynamics is observed in this complex. For the [C(-H)Ba](+)complex produced by electrospray ionization two isomers ([C((-H))KAN1OBa](+)and [C((-H))KAN3OBa](+)) were identified, in which Ba(2+)interacts simultaneously with the C=O group and the N1 or N3 atom of the keto-amino [C(-H)](-), respectively. A comparison with the related [C(-H)Pb](+)complex (J. Y. Salpin et al.,Chem. Phys. Chem.2014, 15, 2959-2971) is also presented.
引用
收藏
页码:2571 / 2582
页数:12
相关论文
共 50 条
  • [1] The interaction of inulin oligosaccharides with Ba2+ studied by H-1 NMR spectroscopy.
    Timmermans, JW
    Bitter, MGJW
    deWit, D
    Vliegenthart, JFG
    JOURNAL OF CARBOHYDRATE CHEMISTRY, 1997, 16 (02) : 213 - 230
  • [2] Aromatic C-H bond activation revealed by infrared multiphoton dissociation spectroscopy
    Jasikova, Lucie
    Hanikyrova, Eva
    Schroeder, Detlef
    Roithova, Jana
    JOURNAL OF MASS SPECTROMETRY, 2012, 47 (04): : 460 - 465
  • [3] Unraveling the Hydration Properties of the Ba2+ Aqua Ion: the Interplay of Quantum Mechanics, Molecular Dynamics, and EXAFS Spectroscopy
    Migliorati, Valentina
    Caruso, Alessandro
    D'Angelo, Paola
    INORGANIC CHEMISTRY, 2019, 58 (21) : 14551 - 14559
  • [4] Interaction between dissolved Ba2+ and PAA-NH4 dispersant in aqueous barium titanate suspensions
    Li, CC
    Jean, JH
    JOURNAL OF THE AMERICAN CERAMIC SOCIETY, 2002, 85 (06) : 1449 - 1455
  • [5] INFRARED KINETIC SPECTROSCOPY OF C2H AND C2D
    STEPHENS, JW
    YAN, WB
    RICHNOW, ML
    SOLKA, H
    CURL, RF
    JOURNAL OF MOLECULAR STRUCTURE, 1988, 190 : 41 - 60
  • [6] Unimolecular Fragmentation of Deprotonated Diproline [Pro2-H]- Studied by Chemical Dynamics Simulations and IRMPD Spectroscopy
    Martin-Somer, Ana
    Martens, Jonathan
    Grzetic, Josipa
    Hase, William L.
    Oomens, Jos
    Spezia, Riccardo
    JOURNAL OF PHYSICAL CHEMISTRY A, 2018, 122 (10): : 2612 - 2625
  • [7] MULTIPHOTON IONIZATION SPECTROSCOPY OF GERMANIUM ATOMS PRODUCED BY MULTIPHOTON DISSOCIATION OF GE(C2H5)4
    ANTMAN, M
    HILT, L
    CHRISTOPHY, E
    BELBRUNO, JJ
    CHEMICAL PHYSICS LETTERS, 1994, 221 (3-4) : 294 - 300
  • [8] Coupling between Ba2+ extrusion and H+ uptake by the plasma membrane calcium ATPase in snail neurons
    Thomas, Roger C.
    JOURNAL OF GENERAL PHYSIOLOGY, 2008, 132 (01): : 22A - 22A
  • [9] Raman spectroscopy study on the C/H•••π interaction between benzene and chloroform
    Liu Tian-Yuan
    Sun Cheng-Lin
    Li Zuo-Wei
    Zhou Mi
    ACTA PHYSICA SINICA, 2012, 61 (10)
  • [10] INFRARED-LASER SPECTROSCOPY OF THE C2H RADICAL
    YAN, WB
    AMANO, T
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 1991, 202 : 332 - PHYS