Molecular control of activation and priming in macrophages

被引:379
作者
Glass, Christopher K. [1 ,2 ]
Natoli, Gioacchino [3 ]
机构
[1] Univ Calif San Diego, Sch Med, Dept Cellular & Mol Med, La Jolla, CA 92093 USA
[2] Univ Calif San Diego, Sch Med, Dept Med, La Jolla, CA 92093 USA
[3] European Inst Oncol, Dept Expt Oncol, Milan, Italy
关键词
INDUCIBLE GENE-EXPRESSION; TRANSCRIPTION FACTORS; INNATE IMMUNITY; FUNCTIONAL POLARIZATION; NUCLEOSOME OCCUPANCY; ENHANCER RNAS; HUMAN GENOME; CPG ISLANDS; PPAR-GAMMA; CELL-TYPES;
D O I
10.1038/ni.3306
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
In tissues, macrophages are exposed to metabolic, homeostatic and immunoregulatory signals of local or systemic origin that influence their basal functions and responses to danger signals. Signal-transduction pathways regulated by extracellular signals are coupled to distinct sets of broadly expressed stimulus-regulated transcription factors whose ability to elicit gene-expression changes is influenced by the accessibility of their binding sites in the macrophage genome. In turn, accessibility of macrophage-specific transcriptional regulatory elements (enhancers and promoters) is specified by transcription factors that determine the macrophage lineage or impose their tissue-specific properties. Here we review recent findings that advance the understanding of mechanisms underlying priming and signal-dependent activation of macrophages and discuss the effect of genetic variation on these processes.
引用
收藏
页码:26 / 33
页数:8
相关论文
共 86 条
  • [1] Pathogen recognition and innate immunity
    Akira, S
    Uematsu, S
    Takeuchi, O
    [J]. CELL, 2006, 124 (04) : 783 - 801
  • [2] An atlas of active enhancers across human cell types and tissues
    Andersson, Robin
    Gebhard, Claudia
    Miguel-Escalada, Irene
    Hoof, Ilka
    Bornholdt, Jette
    Boyd, Mette
    Chen, Yun
    Zhao, Xiaobei
    Schmidl, Christian
    Suzuki, Takahiro
    Ntini, Evgenia
    Arner, Erik
    Valen, Eivind
    Li, Kang
    Schwarzfischer, Lucia
    Glatz, Dagmar
    Raithel, Johanna
    Lilje, Berit
    Rapin, Nicolas
    Bagger, Frederik Otzen
    Jorgensen, Mette
    Andersen, Peter Refsing
    Bertin, Nicolas
    Rackham, Owen
    Burroughs, A. Maxwell
    Baillie, J. Kenneth
    Ishizu, Yuri
    Shimizu, Yuri
    Furuhata, Erina
    Maeda, Shiori
    Negishi, Yutaka
    Mungall, Christopher J.
    Meehan, Terrence F.
    Lassmann, Timo
    Itoh, Masayoshi
    Kawaji, Hideya
    Kondo, Naoto
    Kawai, Jun
    Lennartsson, Andreas
    Daub, Carsten O.
    Heutink, Peter
    Hume, David A.
    Jensen, Torben Heick
    Suzuki, Harukazu
    Hayashizaki, Yoshihide
    Mueller, Ferenc
    Forrest, Alistair R. R.
    Carninci, Piero
    Rehli, Michael
    Sandelin, Albin
    [J]. NATURE, 2014, 507 (7493) : 455 - +
  • [3] Transcribed enhancers lead waves of coordinated transcription in transitioning mammalian cells
    Arner, Erik
    Daub, Carsten O.
    Vitting-Seerup, Kristoffer
    Andersson, Robin
    Lilje, Berit
    Drablos, Finn
    Lennartsson, Andreas
    Roennerblad, Michelle
    Hrydziuszko, Olga
    Vitezic, Morana
    Freeman, Tom C.
    Alhendi, Ahmad M. N.
    Arner, Peter
    Axton, Richard
    Baillie, J. Kenneth
    Beckhouse, Anthony
    Bodega, Beatrice
    Briggs, James
    Brombacher, Frank
    Davis, Margaret
    Detmar, Michael
    Ehrlund, Anna
    Endoh, Mitsuhiro
    Eslami, Afsaneh
    Fagiolini, Michela
    Fairbairn, Lynsey
    Faulkner, Geoffrey J.
    Ferrai, Carmelo
    Fisher, Malcolm E.
    Forrester, Lesley
    Goldowitz, Daniel
    Guler, Reto
    Ha, Thomas
    Hara, Mitsuko
    Herlyn, Meenhard
    Ikawa, Tomokatsu
    Kai, Chieko
    Kawamoto, Hiroshi
    Khachigian, Levon M.
    Klinken, S. Peter
    Kojima, Soichi
    Koseki, Haruhiko
    Klein, Sarah
    Mejhert, Niklas
    Miyaguchi, Ken
    Mizuno, Yosuke
    Morimoto, Mitsuru
    Morris, Kelly J.
    Mummery, Christine
    Nakachi, Yutaka
    [J]. SCIENCE, 2015, 347 (6225) : 1010 - 1014
  • [4] Mitogen-activated protein kinases in innate immunity
    Arthur, J. Simon C.
    Ley, Steven C.
    [J]. NATURE REVIEWS IMMUNOLOGY, 2013, 13 (09) : 679 - 692
  • [5] Bcl-6 and NF-κB cistromes mediate opposing regulation of the innate immune response
    Barish, Grant D.
    Yu, Ruth T.
    Karunasiri, Malith
    Ocampo, Corinne B.
    Dixon, Jesse
    Benner, Chris
    Dent, Alexander L.
    Tangirala, Rajendra K.
    Evans, Ronald M.
    [J]. GENES & DEVELOPMENT, 2010, 24 (24) : 2760 - 2765
  • [6] Coregulation of Transcription Factor Binding and Nucleosome Occupancy through DNA Features of Mammalian Enhancers
    Barozzi, Iros
    Simonatto, Marta
    Bonifacio, Silvia
    Yang, Lin
    Rohs, Remo
    Ghisletti, Serena
    Natoli, Gioacchino
    [J]. MOLECULAR CELL, 2014, 54 (05) : 844 - 857
  • [7] High-resolution profiling of histone methylations in the human genome
    Barski, Artern
    Cuddapah, Suresh
    Cui, Kairong
    Roh, Tae-Young
    Schones, Dustin E.
    Wang, Zhibin
    Wei, Gang
    Chepelev, Iouri
    Zhao, Keji
    [J]. CELL, 2007, 129 (04) : 823 - 837
  • [8] Transcript Dynamics of Proinflammatory Genes Revealed by Sequence Analysis of Subcellular RNA Fractions
    Bhatt, Dev M.
    Pandya-Jones, Amy
    Tong, Ann-Jay
    Barozzi, Iros
    Lissner, Michelle M.
    Natoli, Gioacchino
    Black, Douglas L.
    Smale, Stephen T.
    [J]. CELL, 2012, 150 (02) : 279 - 290
  • [9] DAMPs, PAMPs and alarmins: all we need to know about danger
    Bianchi, Marco E.
    [J]. JOURNAL OF LEUKOCYTE BIOLOGY, 2007, 81 (01) : 1 - 5
  • [10] The cGAS-cGAMP-STING Pathway of Cytosolic DNA Sensing and Signaling
    Cai, Xin
    Chiu, Yu-Hsin
    Chen, Zhijian J.
    [J]. MOLECULAR CELL, 2014, 54 (02) : 289 - 296