The complete mitochondrial genome of the Cape honey bee, Apis mellifera capensis Esch (Insecta: hymenoptera: apidae)

被引：18

作者：

Eimanifar, Amin ^{[1
]}

Kimball, Rebecca T. ^{[2
]}

Braun, Edward L. ^{[2
]}

Ellis, James D. ^{[1
]}

机构：

[1] Univ Florida, Dept Entomol & Nematol, Honey Bee Res & Extens Lab, Gainesville, FL 32611 USA

[2] Univ Florida, Dept Biol, Gainesville, FL USA

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期

基金：

美国农业部;

关键词：

Cape honey bee; mitogenome; next-generation sequencing; Apis mellifera capensis; South Africa; social parasite; ORGANIZATION; SEQUENCE;

D O I：

10.1080/23802359.2016.1241682

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

We characterized the complete mitogenome sequence of the Cape honey bee, Apis mellifera capensis, from South Africa. The circle genome is 16,470 bp in length, with the base composition of 43.2% A, 9.6% C, 5.6% G, and 41.5% T. The assembled mitogenome has 13 protein-coding genes (PCGs), 22 transfer RNAs, two ribosomal RNA genes, and one control region. All protein-coding genes are initiated by ATT, ATC, ATG or ATA codons and are terminated by the typical stop codon TAA. The heavy strand encodes four protein-coding genes, eight tRNAs, and two rRNAs. The light strand encodes nine protein-coding genes and 14 tRNAs. The complete mitogenome sequence of A. m. capensis is identical to the gene arrangement found in other A. mellifera mitogenomes and it provides essential and important DNA molecular data for further phylogenetic and evolutionary analysis of members of the genus Apis.

引用

页码：817 / 819

页数：3

共 13 条

[11]

Onions GW., 1912, AGR J UNION S AFR, V1, P720

[12] RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models [J].

Stamatakis, Alexandros .

BIOINFORMATICS, 2006, 22 (21) :2688-2690

[13] NAVIGATING THE TIP OF THE GENOMIC ICEBERG: NEXT-GENERATION SEQUENCING FOR PLANT SYSTEMATICS [J].

Straub, Shannon C. K. ;

Parks, Matthew ;

Weitemier, Kevin ;

Fishbein, Mark ;

Cronn, Richard C. ;

Liston, Aaron .

AMERICAN JOURNAL OF BOTANY, 2012, 99 (02) :349-364

← 1 2 →