Chromatin priming of genes in development: Concepts, mechanisms and consequences

被引:35
作者
Bonifer, Constanze [1 ]
Cockerill, Peter N. [1 ]
机构
[1] Univ Birmingham, Inst Canc & Genom Sci, Coll Med & Dent, Birmingham B15 2TT, W Midlands, England
基金
英国生物技术与生命科学研究理事会; 英国医学研究理事会;
关键词
TRANSCRIPTION FACTOR-BINDING; EMBRYONIC STEM-CELLS; RNA-POLYMERASE-II; BETA-GLOBIN LOCUS; CD8(+) T-CELLS; IN-VIVO; ENHANCER REPERTOIRES; DNA DEMETHYLATION; REGULATED TRANSCRIPTION; EPIGENETIC REGULATION;
D O I
10.1016/j.exphem.2017.01.003
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
During ontogeny, cells progress through multiple alternate differentiation states by activating distinct gene regulatory networks. In this review, we highlight the important role of chromatin priming in facilitating gene activation during lineage specification and in maintaining an epigenetic memory of previous gene activation. We show that chromatin priming is part of a hugely diverse repertoire of regulatory mechanisms that genes use to ensure that they are expressed at the correct time, in the correct cell type, and at the correct level, but also that they react to signals. We also emphasize how increasing our knowledge of these principles could inform our understanding of developmental failure and disease. (c) 2017 ISEH - International Society for Experimental Hematology. Published by Elsevier Inc.
引用
收藏
页码:1 / 8
页数:8
相关论文
共 95 条
  • [1] Chromatin poises miRNA- and protein-coding genes for expression
    Barski, Artem
    Jothi, Raja
    Cuddapah, Suresh
    Cui, Kairong
    Roh, Tae-Young
    Schones, Dustin E.
    Zhao, Keji
    [J]. GENOME RESEARCH, 2009, 19 (10) : 1742 - 1751
  • [2] The Inducible Tissue-Specific Expression of the Human IL-3/GM-CSF Locus Is Controlled by a Complex Array of Developmentally Regulated Enhancers
    Baxter, Euan W.
    Mirabella, Fabio
    Bowers, Sarion R.
    James, Sally R.
    Bonavita, Aude-Marine
    Bertrand, Elisabeth
    Strogantsev, Ruslan
    Hawwari, Abbas
    Bert, Andrew G.
    de Arce, Andrea Gonzalez
    West, Adam G.
    Bonifer, Constanze
    Cockerill, Peter N.
    [J]. JOURNAL OF IMMUNOLOGY, 2012, 189 (09) : 4459 - 4469
  • [3] Transcription factor access to chromatin
    Beato, M
    Eisfeld, K
    [J]. NUCLEIC ACIDS RESEARCH, 1997, 25 (18) : 3559 - 3563
  • [4] Inducible chromatin priming is associated with the establishment of immunological memory in T cells
    Bevington, Sarah L.
    Cauchy, Pierre
    Piper, Jason
    Bertrand, Elisabeth
    Lalli, Naveen
    Jarvis, Rebecca C.
    Gilding, Liam Niall
    Ott, Sascha
    Bonifer, Constanze
    Cockerill, Peter N.
    [J]. EMBO JOURNAL, 2016, 35 (05) : 515 - 535
  • [5] The chicken lysozyme locus as a paradigm for the complex developmental regulation of eukaryotic gene loci
    Bonifer, C
    Jagle, U
    Huber, MC
    [J]. JOURNAL OF BIOLOGICAL CHEMISTRY, 1997, 272 (42) : 26075 - 26078
  • [6] Developmental regulation of eukaryotic gene loci -: which cis-regulatory information is required?
    Bonifer, C
    [J]. TRENDS IN GENETICS, 2000, 16 (07) : 310 - 315
  • [7] Inherited human OX40 deficiency underlying classic Kaposi sarcoma of childhood
    Byun, Minji
    Ma, Cindy S.
    Akcay, Arzu
    Pedergnana, Vincent
    Palendira, Umaimainthan
    Myoung, Jinjong
    Avery, Danielle T.
    Liu, Yifang
    Abhyankar, Avinash
    Lorenzo, Lazaro
    Schmidt, Monika
    Lim, Hye Kyung
    Cassar, Olivier
    Migaud, Melanie
    Rozenberg, Flore
    Canpolat, Nur
    Aydogan, Gonul
    Fleckenstein, Bernhard
    Bustamante, Jacinta
    Picard, Capucine
    Gessain, Antoine
    Jouanguy, Emmanuelle
    Cesarman, Ethel
    Olivier, Martin
    Gros, Philippe
    Abel, Laurent
    Croft, Michael
    Tangye, Stuart G.
    Casanova, Jean-Laurent
    [J]. JOURNAL OF EXPERIMENTAL MEDICINE, 2013, 210 (09) : 1743 - 1759
  • [8] Transcription-dependent silencing of inducible convergent transgenes in transgenic mice
    Calero-Nieto, Fernando J.
    Bert, Andrew G.
    Cockerill, Peter N.
    [J]. EPIGENETICS & CHROMATIN, 2010, 3
  • [9] Shadow Enhancers Are Pervasive Features of Developmental Regulatory Networks
    Cannavo, Enrico
    Khoueiry, Pierre
    Garfield, David A.
    Geeleher, Paul
    Zichner, Thomas
    Gustafson, E. Hilary
    Ciglar, Lucia
    Korbel, Jan O.
    Furlong, Eileen E. M.
    [J]. CURRENT BIOLOGY, 2016, 26 (01) : 38 - 51
  • [10] A biochemical signature for rapid recall of memory CD4 T cells
    Chandok, Meena R.
    Okoye, Francesca I.
    Ndejembi, Modesta P.
    Farber, Donna L.
    [J]. JOURNAL OF IMMUNOLOGY, 2007, 179 (06) : 3689 - 3698