Imaging tissue-mimic with light sheet microscopy: A comparative guideline

被引:27
作者
Andilla, Jordi [1 ]
Jorand, Raphael [2 ]
Olarte, Omar E. [1 ]
Dufour, Alexandre C. [3 ,4 ]
Cazales, Martine [2 ]
Montagner, Yoann L. E. [3 ,4 ]
Ceolato, Romain [5 ]
Riviere, Nicolas [5 ]
Olivo-Marin, Jean-Christophe [3 ,4 ]
Loza-Alvarez, Pablo [1 ]
Lorenzo, Corinne [2 ]
机构
[1] Inst Ciences Foton, ICFO, Av Carl Friedrich Gauss 3, Barcelona 08860, Spain
[2] Univ Toulouse, ITAV, CNRS, UPS, Toulouse, France
[3] Inst Pasteur, BioImage Anal Unit, F-75015 Paris, France
[4] CNRS, UMR 3691, F-75015 Paris, France
[5] Off Natl Etud & Rech Aerosp, French Aerosp Lab, F-31100 Toulouse, France
来源
SCIENTIFIC REPORTS | 2017年 / 7卷
关键词
FLUORESCENCE MICROSCOPY; BESSEL BEAMS; CELL; DEEP; DYNAMICS; PLATFORM; MODELS;
D O I
10.1038/srep44939
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Tissue mimics (TMs) on the scale of several hundred microns provide a beneficial cell culture configuration for in vitro engineered tissue and are currently under the spotlight in tissue engineering and regenerative medicine. Due to the cell density and size, TMs are fairly inaccessible to optical observation and imaging within these samples remains challenging. Light Sheet Fluorescence Microscopy (LSFM)- an emerging and attractive technique for 3D optical sectioning of large samples-appears to be a particularly well-suited approach to deal with them. In this work, we compared the effectiveness of different light sheet illumination modalities reported in the literature to improve resolution and/or light exposure for complex 3D samples. In order to provide an acute and fair comparative assessment, we also developed a systematic, computerized benchmarking method. The outcomes of our experiment provide meaningful information for valid comparisons and arises the main differences between the modalities when imaging different types of TMs.
引用
收藏
页数:14
相关论文
共 48 条
  • [1] Aad G, 2014, EUR PHYS J C, V74, DOI 10.1140/epjc/s10052-014-3034-9
  • [2] Efficient processing and analysis of large-scale light-sheet microscopy data
    Amat, Fernando
    Hoeckendorf, Burkhard
    Wan, Yinan
    Lemon, William C.
    McDole, Katie
    Keller, Philipp J.
    [J]. NATURE PROTOCOLS, 2015, 10 (11) : 1679 - 1696
  • [3] Amat F, 2014, NAT METHODS, V11, P951, DOI [10.1038/NMETH.3036, 10.1038/nmeth.3036]
  • [4] The difficulty of a fair comparison
    不详
    [J]. NATURE METHODS, 2015, 12 (04) : 273 - 273
  • [5] Scanned light sheet microscopy with confocal slit detection
    Baumgart, Eugen
    Kubitscheck, Ulrich
    [J]. OPTICS EXPRESS, 2012, 20 (19): : 21805 - 21814
  • [6] Preparation strategy and illumination of three-dimensional cell cultures in light sheet-based fluorescence microscopy
    Bruns, Thomas
    Schickinger, Sarah
    Wittig, Rainer
    Schneckenburger, Herbert
    [J]. JOURNAL OF BIOMEDICAL OPTICS, 2012, 17 (10)
  • [7] Reflectances from a supercontinuum laser-based instrument: hyperspectral, polarimetric and angular measurements
    Ceolato, Romain
    Riviere, Nicolas
    Hespel, Laurent
    [J]. OPTICS EXPRESS, 2012, 20 (28): : 29413 - 29425
  • [8] Lattice light-sheet microscopy: Imaging molecules to embryos at high spatiotemporal resolution
    Chen, Bi-Chang
    Legant, Wesley R.
    Wang, Kai
    Shao, Lin
    Milkie, Daniel E.
    Davidson, Michael W.
    Janetopoulos, Chris
    Wu, Xufeng S.
    Hammer, John A., III
    Liu, Zhe
    English, Brian P.
    Mimori-Kiyosue, Yuko
    Romero, Daniel P.
    Ritter, Alex T.
    Lippincott-Schwartz, Jennifer
    Fritz-Laylin, Lillian
    Mullins, R. Dyche
    Mitchell, Diana M.
    Bembenek, Joshua N.
    Reymann, Anne-Cecile
    Boehme, Ralph
    Grill, Stephan W.
    Wang, Jennifer T.
    Seydoux, Geraldine
    Tulu, U. Serdar
    Kiehart, Daniel P.
    Betzig, Eric
    [J]. SCIENCE, 2014, 346 (6208) : 439 - +
  • [9] Chylek P, 1986, Appl Opt, V25, P3166
  • [10] Wavefront corrected light sheet microscopy in turbid media
    Dalgarno, H. I. C.
    Cizmar, T.
    Vettenburg, T.
    Nylk, J.
    Gunn-Moore, F. J.
    Dholakia, K.
    [J]. APPLIED PHYSICS LETTERS, 2012, 100 (19)