HEp-2 Cell Image Classification With Deep Convolutional Neural Networks

被引:153
作者
Gao, Zhimin [1 ]
Wang, Lei [1 ]
Zhou, Luping [1 ]
Zhang, Jianjia [1 ]
机构
[1] Univ Wollongong, Sch Comp & Informat Technol, Wollongong, NSW 2522, Australia
关键词
Deep convolutional neural networks; indirect immunofluorescence (IIF); staining patterns classification; PATTERN-RECOGNITION; RECEPTIVE FIELDS; HISTOGRAMS; FEATURES;
D O I
10.1109/JBHI.2016.2526603
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Efficient Human Epithelial-2 cell image classification can facilitate the diagnosis of many autoimmune diseases. This paper proposes an automatic framework for this classification task, by utilizing the deep convolutional neural networks (CNNs) which have recently attracted intensive attention in visual recognition. In addition to describing the proposed classification framework, this paper elaborates several interesting observations and findings obtained by our investigation. They include the important factors that impact network design and training, the role of rotation-based data augmentation for cell images, the effectiveness of cell image masks for classification, and the adaptability of the CNN-based classification system across different datasets. Extensive experimental study is conducted to verify the above findings and compares the proposed framework with the well-established image classification models in the literature. The results on benchmark datasets demonstrate that 1) the proposed framework can effectively outperform existing models by properly applying data augmentation, 2) our CNN-based framework has excellent adaptability across different datasets, which is highly desirable for cell image classification under varying laboratory settings. Our system is ranked high in the cell image classification competition hosted by ICPR 2014.
引用
收藏
页码:416 / 428
页数:13
相关论文
共 34 条
[1]  
[Anonymous], 2010, P 18 ACM INT C MULT, DOI [10.1145/1873951.1874249, 10.1145/1873951.1874249.2]
[2]  
Bengio Yoshua, 2012, Neural Networks: Tricks of the Trade. Second Edition: LNCS 7700, P437, DOI 10.1007/978-3-642-35289-8_26
[3]  
Boureau Y. L., 2010, P ICML 10 P 27 INT C, P111
[4]  
Brian M. V., 2014, P 22 INT C PATT REC
[5]  
Buyssens Pierre, 2013, Computer Vision - ACCV 2012. 11th Asian Conference on Computer Vision. Revised Selected Papers, P342, DOI 10.1007/978-3-642-37444-9_27
[6]  
Csurka G., 2004, WORKSH STAT LEARN CO, V1, P1, DOI DOI 10.1234/12345678
[7]   Histograms of oriented gradients for human detection [J].
Dalal, N ;
Triggs, B .
2005 IEEE COMPUTER SOCIETY CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION, VOL 1, PROCEEDINGS, 2005, :886-893
[8]  
Deng J, 2010, LECT NOTES COMPUT SC, V6315, P71, DOI 10.1007/978-3-642-15555-0_6
[9]   Fisher tensors for classifying human epithelial cells [J].
Faraki, Masoud ;
Harandi, Mehrtash T. ;
Wiliem, Arnold ;
Lovell, Brian C. .
PATTERN RECOGNITION, 2014, 47 (07) :2348-2359
[10]   Pattern recognition in stained HEp-2 cells: Where are we now? [J].
Foggia, Pasquale ;
Percannella, Gennaro ;
Saggese, Alessia ;
Vento, Mario .
PATTERN RECOGNITION, 2014, 47 (07) :2305-2314