Pressure- and heat-induced protein unfolding in bacterial cells: crowding vs. sticking

被引:16
作者
Chen, Timothy [1 ]
Dave, Kapil [1 ,2 ]
Gruebele, Martin [1 ,2 ,3 ]
机构
[1] Univ Illinois, Dept Chem, 1209 W Calif St, Urbana, IL 61801 USA
[2] Univ Illinois, Ctr Biophys & Quantitat Biol, Urbana, IL 61801 USA
[3] Univ Illinois, Dept Phys, 1110 W Green St, Urbana, IL 61801 USA
基金
美国国家科学基金会;
关键词
E; coli; in-cell folding; pressure denaturation; quinary interaction; HIGH HYDROSTATIC-PRESSURE; ESCHERICHIA-COLI; FOLDING KINETICS; EUKARYOTIC CELLS; STABILITY; DYNAMICS; EVOLUTION; INSIGHTS;
D O I
10.1002/1873-3468.13025
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
In-cell protein stability is increased by crowding, but can be reduced by destabilizing surface interactions. Will different denaturation techniques yield similar trends? Here, we apply pressure and thermal denaturation to green fluorescent protein/ReAsH-labeled yeast phosphoglycerate kinase (PGK) in Escherichia coli cells. Pressure denaturation is more two state-like in E. coli than in vitro, stabilizing the native state. Thermal denaturation destabilizes PGK in E. coli, unlike in mammalian cells. Results in wild-type MG1655 strain are corroborated in pressure-resistant J1 strain, where PGK is less prone to aggregation. Thus, destabilizing surface interactions overcome stabilizing crowding in the E. coli cytoplasm under thermal denaturation. but not under pressure denaturation.
引用
收藏
页码:1357 / 1365
页数:9
相关论文
共 33 条
[1]   Heat shock protein-mediated resistance to high hydrostatic pressure in Escherichia coli [J].
Aertsen, A ;
Vanoirbeek, K ;
De Spiegeleer, P ;
Sermon, J ;
Hauben, K ;
Farewell, A ;
Nyström, T ;
Michiels, CW .
APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2004, 70 (05) :2660-2666
[2]  
Balny C., 2002, Frontiers in high pressure biochemistry and biophysics
[3]   Molecular crowding enhances native state stability and refolding rates of globular proteins [J].
Cheung, MS ;
Klimov, D ;
Thirumalai, D .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (13) :4753-4758
[4]   Molecules: What Kind of a Bag of Atoms? [J].
Chowdary, Praveen D. ;
Gruebele, Martin .
JOURNAL OF PHYSICAL CHEMISTRY A, 2009, 113 (47) :13139-13143
[5]   High-pressure processing - effects on microbial food safety and food quality [J].
Considine, Kiera M. ;
Kelly, Alan L. ;
Fitzgerald, Gerald F. ;
Hill, Colin ;
Sleator, Roy D. .
FEMS MICROBIOLOGY LETTERS, 2008, 281 (01) :1-9
[6]   Insights into protein compressibility from molecular dynamics simulations [J].
Dadarlat, VM ;
Post, CB .
JOURNAL OF PHYSICAL CHEMISTRY B, 2001, 105 (03) :715-724
[7]   Protein Stability and Folding Kinetics in the Nucleus and Endoplasmic Reticulum of Eucaryotic Cells [J].
Dhar, A. ;
Girdhar, K. ;
Singh, D. ;
Gelman, H. ;
Ebbinghaus, S. ;
Gruebele, M. .
BIOPHYSICAL JOURNAL, 2011, 101 (02) :421-430
[8]   Fast kinetics and mechanisms in protein folding [J].
Eaton, WA ;
Muñoz, V ;
Hagen, SJ ;
Jas, GS ;
Lapidus, LJ ;
Henry, ER ;
Hofrichter, J .
ANNUAL REVIEW OF BIOPHYSICS AND BIOMOLECULAR STRUCTURE, 2000, 29 :327-359
[9]  
Ebbinghaus S, 2010, NAT METHODS, V7, P319, DOI [10.1038/nmeth.1435, 10.1038/NMETH.1435]
[10]   THERMAL-EXPANSION OF A PROTEIN [J].
FRAUENFELDER, H ;
HARTMANN, H ;
KARPLUS, M ;
KUNTZ, ID ;
KURIYAN, J ;
PARAK, F ;
PETSKO, GA ;
RINGE, D ;
TILTON, RF ;
CONNOLLY, ML ;
MAX, N .
BIOCHEMISTRY, 1987, 26 (01) :254-261