ZNFX-1 Functions within Perinuclear Nuage to Balance Epigenetic Signals

被引:73
作者
Ishidate, Takao [1 ,3 ,5 ]
Ozturk, Ahmet R. [1 ,5 ]
Durning, Daniel J. [1 ]
Sharma, Rita [1 ,4 ]
Shen, En-zhi [1 ]
Chen, Hao [2 ]
Seth, Meetu [1 ]
Shirayama, Masaki [1 ,3 ]
Mello, Craig C. [1 ,3 ]
机构
[1] Univ Massachusetts, Med Sch, RNA Therapeut Inst, Worcester, MA 01605 USA
[2] Univ Massachusetts, Med Sch, Program Bioinformat & Integrat Biol, Worcester, MA 01605 USA
[3] Howard Hughes Med Inst, Worcester, MA 01605 USA
[4] Ohio Univ, Dept Biol Sci, Athens, OH 45701 USA
[5] Intellia Therapeut, Cambridge, MA 02139 USA
关键词
GERMLINE GENE-EXPRESSION; C. ELEGANS GERMLINE; CAENORHABDITIS-ELEGANS; RNA INTERFERENCE; P GRANULES; ARGONAUTE CSR-1; GENOME; PIRNAS; METHYLATION; FERTILITY;
D O I
10.1016/j.molcel.2018.04.009
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Animal cells have a remarkable capacity to adopt durable and heritable gene expression programs or epigenetic states that define the physical properties and diversity of somatic cell types. The maintenance of epigenetic programs depends on poorly understood pathways that prevent gain or loss of inherited signals. In the germline, epigenetic factors are enriched in liquid-like perinuclear condensates called nuage. Here, we identify the deeply conserved helicase-domain protein, ZNFX-1, as an epigenetic regulator and component of nuage that interacts with Argonaute systems to balance epigenetic inheritance. Our findings suggest that ZNFX-1 promotes the 3' recruitment of machinery that propagates the small RNA epigenetic signal and thus counteracts a tendency for Argonaute targeting to shift 5' along the mRNA. These functional insights support the idea that recently identified subdomains of nuage, including ZNFX-1 granules or "Z-granules,'' may define spatial and temporal zones of molecular activity during epigenetic regulation.
引用
收藏
页码:639 / +
页数:17
相关论文
共 48 条
[1]   piRNAs Can Trigger a Multigenerational Epigenetic Memory in the Germline of C. elegans [J].
Ashe, Alyson ;
Sapetschnig, Alexandra ;
Weick, Eva-Maria ;
Mitchell, Jacinth ;
Bagijn, Marloes P. ;
Cording, Amy C. ;
Doebley, Anna-Lisa ;
Goldstein, Leonard D. ;
Lehrbach, Nicolas J. ;
Le Pen, Jeremie ;
Pintacuda, Greta ;
Sakaguchi, Aisa ;
Sarkies, Peter ;
Ahmed, Shawn ;
Miska, Eric A. .
CELL, 2012, 150 (01) :88-99
[2]   Function, Targets, and Evolution of Caenorhabditis elegans piRNAs [J].
Bagijn, Marloes P. ;
Goldstein, Leonard D. ;
Sapetschnig, Alexandra ;
Weick, Eva-Maria ;
Bouasker, Samir ;
Lehrbach, Nicolas J. ;
Simard, Martin J. ;
Miska, Eric A. .
SCIENCE, 2012, 337 (6094) :574-578
[3]   PRG-1 and 21U-RNAs interact to form the piRNA complex required for fertility in C-elegans [J].
Batista, Pedro J. ;
Ruby, J. Graham ;
Claycomb, Julie M. ;
Chiang, Rosaria ;
Fahlgren, Noah ;
Kasschau, Kristin D. ;
Chaves, Daniel A. ;
Gu, Weifeng ;
Vasale, Jessica J. ;
Duan, Shenghua ;
Conte, Darryl, Jr. ;
Luo, Shujun ;
Schroth, Gary P. ;
Carrington, James C. ;
Bartel, David P. ;
Mello, Craig C. .
MOLECULAR CELL, 2008, 31 (01) :67-78
[4]   Germline P Granules Are Liquid Droplets That Localize by Controlled Dissolution/Condensation [J].
Brangwynne, Clifford P. ;
Eckmann, Christian R. ;
Courson, David S. ;
Rybarska, Agata ;
Hoege, Carsten ;
Gharakhani, Joebin ;
Juelicher, Frank ;
Hyman, Anthony A. .
SCIENCE, 2009, 324 (5935) :1729-1732
[5]   An Epigenetic Role for Maternally Inherited piRNAs in Transposon Silencing [J].
Brennecke, Julius ;
Malone, Colin D. ;
Aravin, Alexei A. ;
Sachidanandam, Ravi ;
Stark, Alexander ;
Hannon, Gregory J. .
SCIENCE, 2008, 322 (5906) :1387-1392
[6]  
BRENNER S, 1974, GENETICS, V77, P71
[7]   A nuclear Argonaute promotes multigenerational epigenetic inheritance and germline immortality [J].
Buckley, Bethany A. ;
Burkhart, Kirk B. ;
Gu, Sam Guoping ;
Spracklin, George ;
Kershner, Aaron ;
Fritz, Heidi ;
Kimble, Judith ;
Fire, Andrew ;
Kennedy, Scott .
NATURE, 2012, 489 (7416) :447-451
[8]   A Pre-mRNA-Associating Factor Links Endogenous siRNAs to Chromatin Regulation [J].
Burkhart, Kirk B. ;
Guang, Shouhong ;
Buckley, Bethany A. ;
Wong, Lily ;
Bochner, Aaron F. ;
Kennedy, Scott .
PLOS GENETICS, 2011, 7 (08)
[9]   RNA interference in the nucleus: roles for small RNAs in transcription, epigenetics and beyond [J].
Castel, Stephane E. ;
Martienssen, Robert A. .
NATURE REVIEWS GENETICS, 2013, 14 (02) :100-112
[10]   A member of the polymerase β nucleotidyltransferase superfamily is required for RNA interference in C-elegans [J].
Chen, CCG ;
Simard, MJ ;
Tabara, H ;
Brownell, DR ;
McCollough, JA ;
Mello, CC .
CURRENT BIOLOGY, 2005, 15 (04) :378-383