Diversity of Penicillium section Citrina within the fynbos biome of South Africa, including a new species from a Protea repens infructescence

被引:24
作者
Visagie, Cobus M. [1 ,2 ]
Seifert, Keith A. [2 ]
Houbraken, Jos [3 ]
Samson, Robert A. [3 ]
Jacobs, Karin [1 ]
机构
[1] Univ Stellenbosch, Dept Microbiol, ZA-7600 Stellenbosch, South Africa
[2] Eastern Cereal & Oilseed Res Ctr, Ottawa, ON K1A 0C6, Canada
[3] CBS KVAW Fungal Biodivers Ctr, NL-3584 CT Utrecht, Netherlands
基金
新加坡国家研究基金会;
关键词
arthropod vectoring; biodiversity; consilient; taxonomy; mites; MEASURING BETA-DIVERSITY; PHYLOGENETIC ANALYSIS; SP NOV; IDENTIFICATION; TAXONOMY; REGION; BIODIVERSITY; SEQUENCES; ADDITIONS; THIERSII;
D O I
10.3852/13-256
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
During a survey of the fynbos biome in the Western Cape of South Africa, 61 Penicillium species were isolated and nine belong to Penicillium section Citrina. Based on morphology and multigene phylogenies, section Citrina species were identified as P. cairnsense, P. citrinum, P. pancosmium, P. pasqualense, P. sanguifluum, P. sizovae, P. sumatrense and P. ubiquetum. One of the species displayed unique phenotypic characters and DNA sequences and is described here as P. sucrivorum. Multigene phylogelies consistently resolved the new species in a clade with P. aurantiacobrunneum, P. cairnsense, P. miczynksii, P. neomiczynskii and P. quebecense. However, ITS, beta-tubulin and calmodulin gene sequences are unique for P. sucrivorum and growth rates on various media, the ability to grow at 30 C, a positive Ehrlich reaction and the absence of sclerotia on all media examined, distinguish P. sucrivorum from all of its close relatives.
引用
收藏
页码:537 / 552
页数:16
相关论文
共 47 条
[31]  
2
[32]   Mite-Mediated Hyperphoretic Dispersal of Ophiostoma spp. from the Infructescences of South African Protea spp. [J].
Roets, F. ;
Crous, P. W. ;
Wingfield, M. J. ;
Dreyer, L. L. .
ENVIRONMENTAL ENTOMOLOGY, 2009, 38 (01) :143-152
[33]   MrBayes 3: Bayesian phylogenetic inference under mixed models [J].
Ronquist, F ;
Huelsenbeck, JP .
BIOINFORMATICS, 2003, 19 (12) :1572-1574
[34]  
Samson R.A., 2010, CBS Laboratory Manual Series
[35]  
Samson RA, 2004, STUD MYCOL, P175
[36]   Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi [J].
Schoch, Conrad L. ;
Seifert, Keith A. ;
Huhndorf, Sabine ;
Robert, Vincent ;
Spouge, John L. ;
Levesque, C. Andre ;
Chen, Wen ;
Bolchacova, Elena ;
Voigt, Kerstin ;
Crous, Pedro W. ;
Miller, Andrew N. ;
Wingfield, Michael J. ;
Aime, M. Catherine ;
An, Kwang-Deuk ;
Bai, Feng-Yan ;
Barreto, Robert W. ;
Begerow, Dominik ;
Bergeron, Marie-Josee ;
Blackwell, Meredith ;
Boekhout, Teun ;
Bogale, Mesfin ;
Boonyuen, Nattawut ;
Burgaz, Ana R. ;
Buyck, Bart ;
Cai, Lei ;
Cai, Qing ;
Cardinali, G. ;
Chaverri, Priscila ;
Coppins, Brian J. ;
Crespo, Ana ;
Cubas, Paloma ;
Cummings, Craig ;
Damm, Ulrike ;
de Beer, Z. Wilhelm ;
de Hoog, G. Sybren ;
Del-Prado, Ruth ;
Dentinger, B. ;
Dieguez-Uribeondo, J. ;
Divakar, P. K. ;
Douglas, B. ;
Duenas, M. ;
Duong, T. A. ;
Eberhardt, U. ;
Edwards, J. E. ;
Elshahed, M. S. ;
Fliegerova, K. ;
Furtado, M. ;
Garcia, M. A. ;
Ge, Z. W. ;
Griffith, G. W. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2012, 109 (16) :6241-6246
[37]   Biodiversity in the Cladosporium herbarium complex (Davidiellaceae, Capnodiales), with standardisation of methods for Cladosporium taxonomy and diagnostics [J].
Schubert, K. ;
Groenewald, J. Z. ;
Braun, U. ;
DijksterhuiS, J. ;
Starink, M. ;
Hill, C. F. ;
Zalar, P. ;
de Hoog, G. S. ;
Crous, P. W. .
STUDIES IN MYCOLOGY, 2007, (58) :105-156
[38]   Prospects for fungus identification using C01 DNA barcodes, with Penicillium as a test case [J].
Seifert, Keith A. ;
Samson, Robert A. ;
deWaard, Jeremy R. ;
Houbraken, Jos ;
Levesque, C. Andre ;
Moncalvo, Jean-Marc ;
Louis-Seize, Gerry ;
Hebert, Paul D. N. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2007, 104 (10) :3901-3906
[39]   Multilocus sequence identification of Penicillium species in cork bark during plank preparation for the manufacture of stoppers [J].
Serra, Rita ;
Peterson, Stephen ;
Venancio, Armando .
RESEARCH IN MICROBIOLOGY, 2008, 159 (03) :178-186
[40]   Phylogenetic analysis of nucleotide sequences from the ITS region of terverticillate Penicillium species [J].
Skouboe, P ;
Frisvad, JC ;
Taylor, JW ;
Lauritsen, D ;
Boysen, M ;
Rossen, L .
MYCOLOGICAL RESEARCH, 1999, 103 :873-881