Molecular modeling of β-cyclodextrin inclusion complexes with pharmaceutical compounds

被引:7
作者
Alcaro, S [1 ]
Battaglia, D [1 ]
Ortuso, F [1 ]
机构
[1] Magna Graecia Univ Catanzaro, Dipartimento Sci Farmacobiol, Drug Design Lab, Complesso Nini Barbieri, I-88021 Roccelletta Di Borgia, CZ, Italy
关键词
beta-cyclodextrin; host-guest interaction; docking; molecular modeling;
D O I
10.3998/ark.5550190.0005.511
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
Ten molecularly diverse compounds, selected on the basis of the standard free energy of complexation with beta-cyclodextrin, have been used as training set of molecular docking experiments. After the conformational search of each compound the Molecular Interaction Evaluation ( MOLINE) program has been adopted to generate the inclusion geometries. The recognition process has been thermodynamically evaluated by the computational method, theoretical and experimental free energies of complexation have been compared obtaining an high correlation (r(2) > 0.9). A statistical and graphical analysis of the binding inclusion geometries completed the work.
引用
收藏
页码:107 / 117
页数:11
相关论文
共 18 条
[1]   Preparation, characterization, molecular modeling and in vitro activity of paclitaxel-cyclodextrin complexes [J].
Alcaro, S ;
Ventura, CA ;
Paolino, D ;
Battaglia, D ;
Ortuso, F ;
Cattel, L ;
Puglisi, G ;
Fresta, M .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2002, 12 (12) :1637-1641
[2]   Molecular modeling and enzymatic studies of the interaction of a choline analogue and acetylcholinesterase [J].
Alcaro, S ;
Scipione, L ;
Ortuso, F ;
Posca, S ;
Rispoli, V ;
Rotiroti, D .
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS, 2002, 12 (20) :2899-2905
[3]  
Alcaro S, 2000, J COMPUT CHEM, V21, P515, DOI 10.1002/(SICI)1096-987X(200005)21:7<515::AID-JCC2>3.0.CO
[4]  
2-5
[5]  
Alcaro Stefano, 2003, Farmaco (Lausanne), V58, P691, DOI 10.1016/S0014-827X(03)00108-3
[6]   Computer-aided molecular modeling techniques for predicting the stability of drug-cyclodextrin inclusion complexes in aqueous solutions [J].
Faucci, MT ;
Melani, F ;
Mura, P .
CHEMICAL PHYSICS LETTERS, 2002, 358 (5-6) :383-390
[7]   COMPLEXATION REACTIONS OF BETA-CYCLODEXTRIN, PER-(2,3,6-O-METHYL) CYCLOHEPTAAMYLOSE AND GAMMA-CYCLODEXTRIN WITH PHENOLPHTHALEIN, ADAMANTANE CARBOXYLATE AND ADAMANTANE ACETATE [J].
GELB, RI ;
RASO, S ;
ALPER, JS .
SUPRAMOLECULAR CHEMISTRY, 1995, 4 (04) :279-285
[8]   COMPLEXATION OF CARBOXYLIC-ACIDS AND ANIONS BY ALPHA-CYCLODEXTRINS AND BETA-CYCLODEXTRINS [J].
GELB, RI ;
SCHWARTZ, LM .
JOURNAL OF INCLUSION PHENOMENA, 1989, 7 (04) :465-476
[9]   Thermodynamic studies on the cyclodextrin complexation of aromatic and aliphatic guests in water and water-urea mixtures. Experimental evidence for the interaction of urea with arene surfaces [J].
Godinez, LA ;
Schwartz, L ;
Criss, CM ;
Kaifer, AE .
JOURNAL OF PHYSICAL CHEMISTRY B, 1997, 101 (17) :3376-3380
[10]   THERMODYNAMICS OF MOLECULAR RECOGNITION BY CYCLODEXTRINS .1. CALORIMETRIC TITRATION OF INCLUSION COMPLEXATION OF NAPHTHALENESULFONATES WITH ALPHA-CYCLODEXTRIN, BETA-CYCLODEXTRIN, AND GAMMA-CYCLODEXTRIN - ENTHALPY ENTROPY COMPENSATION [J].
INOUE, Y ;
HAKUSHI, T ;
LIU, Y ;
TONG, LH ;
SHEN, BJ ;
JIN, DS .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1993, 115 (02) :475-481