The complete mitochondrial genome of Epicauta chinensis (Coleoptera: Meloidae) and phylogenetic analysis among Coleopteran insects

被引:34
作者
Du, Chao [1 ]
He, Shilin [1 ]
Song, Xuhao [1 ]
Liao, Qi [2 ]
Zhang, Xiuyue [1 ]
Yue, Bisong [1 ]
机构
[1] Sichuan Univ, Coll Life Sci, Minist Educ, Key Lab Bioresources & Ecoenvironm, Chengdu 610064, Peoples R China
[2] Sichuan Key Lab Med Amer Cockroach, Chengdu 610041, Peoples R China
关键词
Epicauta chinensis; Mitochondrial genome; Complete sequence; Molecular phylogeny; BLISTER BEETLES COLEOPTERA; COMPLETE SEQUENCE; MAXIMUM-LIKELIHOOD; APIS-MELLIFERA; CONTROL REGION; WORLD GENERA; RNA GENES; ORGANIZATION; ARTHROPODA; EVOLUTION;
D O I
10.1016/j.gene.2015.12.036
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The blister beetle is an important resource insect due to its defensive substance cantharidin, which was widely used in pharmacology and plant protection. We determined the complete mitochondrial genome of Epicauta chinensis Laporte (Coleoptera: Tenebrionoidae: Meloidae). The circular genome is 15,717 bp long, encoding 13 protein-coding genes (PCGs), two ribosomal RNAs and 22 tRNAs and containing a A + T-rich region with gene arrangement identical to other Coleopteran species. Twelve PCGs start with typical ATN codon, while ATP8 gene initiate with G1T for first report in Insecta. All PCGs terminate with conventional stop codon TAA or TAG. All tRNAs in E. chinensis are predicted to fold into typical cloverleaf secondary structure, except tRNASer(AGN), in which the dihydrouracil arm (DHU arm) could not form stable stem-loop structure. The secondary structure of IrRNA and srRNA comprises 48 helices and 32 helices respectively. The 1101 bp A + T-rich region contains a 15 bp poly-T stretch and microsatellite-like repeats rather than large tandem repetitive sequences. Phylogenetic analysis, based on 13 PCGs of 45 Coleopteran species, show that E. chinensis grouped with Tenebrionidae species. It also support the topology of (((Chrysomelidae + Curculionoidea) + (Cucujoidea + Cleroidea)) + Tenebrionoidea) within Cucujiformia. (C) 2015 Elsevier B.V. All rights reserved.
引用
收藏
页码:274 / 280
页数:7
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