Mapping dynamic QTL for plant height in triticale

被引:51
作者
Wuerschum, Tobias [1 ]
Liu, Wenxin [2 ]
Busemeyer, Lucas [3 ]
Tucker, Matthew R. [4 ]
Reif, Jochen C. [5 ]
Weissmann, Elmar A. [6 ]
Hahn, Volker [1 ]
Ruckelshausen, Arno [3 ]
Maurer, Hans Peter [1 ]
机构
[1] Univ Hohenheim, State Plant Breeding Inst, D-70599 Stuttgart, Germany
[2] China Agr Univ, Crop Genet & Breeding Dept, Beijing 100193, Peoples R China
[3] Univ Appl Sci Osnabruck, Competence Ctr Appl Agr Engn COALA, D-49076 Osnabruck, Germany
[4] Univ Adelaide, ARC Ctr Excellence Plant Cell Walls, Urrbrae, SA 5064, Australia
[5] Leibniz Inst Plant Genet & Crop Plant Res IPK, D-06466 Gatersleben, Germany
[6] Saatzucht Dr Hege GbR Domane Hohebuch, D-74638 Waldenburg, Germany
关键词
Plant height; QTL mapping; Dynamic QTL; BreedVision; Precision phenotyping; QUANTITATIVE TRAIT LOCI; X TRITICOSECALE WITTMACK; GENETIC ARCHITECTURE; CROSS-VALIDATION; DWARFING GENES; COMPLEX TRAITS; GRAIN-YIELD; MAIZE; WHEAT; EPISTASIS;
D O I
10.1186/1471-2156-15-59
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Background: Plant height is a prime example of a dynamic trait that changes constantly throughout adult development. In this study we utilised a large triticale mapping population, comprising 647 doubled haploid lines derived from 4 families, to phenotype for plant height by a precision phenotyping platform at multiple time points. Results: Using multiple-line cross QTL mapping we identified main effect and epistatic QTL for plant height for each of the time points. Interestingly, some QTL were detected at all time points whereas others were specific to particular developmental stages. Furthermore, the contribution of the QTL to the genotypic variance of plant height also varied with time as exemplified by a major QTL identified on chromosome 6A. Conclusions: Taken together, our results in the small grain cereal triticale reveal the importance of considering temporal genetic patterns in the regulation of complex traits such as plant height.
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页数:8
相关论文
共 38 条
[1]   Integration of plant responses to environmentally activated phytohormonal signals [J].
Achard, P ;
Cheng, H ;
De Grauwe, L ;
Decat, J ;
Schoutteten, H ;
Moritz, T ;
Van Der Straeten, D ;
Peng, JR ;
Harberd, NP .
SCIENCE, 2006, 311 (5757) :91-94
[2]   Multiple-line cross QTL mapping for biomass yield and plant height in triticale (x Triticosecale Wittmack) [J].
Alheit, Katharina V. ;
Busemeyer, Lucas ;
Liu, Wenxin ;
Maurer, Hans Peter ;
Gowda, Manje ;
Hahn, Volker ;
Weissmann, Sigrid ;
Ruckelshausen, Arno ;
Reif, Jochen C. ;
Wuerschum, Tobias .
THEORETICAL AND APPLIED GENETICS, 2014, 127 (01) :251-260
[3]   Detection of segregation distortion loci in triticale (x Triticosecale Wittmack) based on a high-density DArT marker consensus genetic linkage map [J].
Alheit, Katharina V. ;
Reif, Jochen C. ;
Maurer, Hans Peter ;
Hahn, Volker ;
Weissmann, Elmar A. ;
Miedaner, Thomas ;
Wuerschum, Tobias .
BMC GENOMICS, 2011, 12
[4]  
[Anonymous], 2010, R LANG ENV STAT COMP
[5]   Connected populations for detecting quantitative trait loci and testing for epistasis: an application in maize [J].
Blanc, G. ;
Charcosset, A. ;
Mangin, B. ;
Gallais, A. ;
Moreau, L. .
THEORETICAL AND APPLIED GENETICS, 2006, 113 (02) :206-224
[6]   Detection of quantitative trait loci on chromosome 5R of rye (Secale cereale L.) [J].
Börner, A ;
Korzun, V ;
Voylokov, AV ;
Weber, WE .
THEORETICAL AND APPLIED GENETICS, 1999, 98 (6-7) :1087-1090
[7]   The relationships between the dwarfing genes of wheat and rye [J].
Borner, A ;
Plaschke, J ;
Korzun, V ;
Worland, AJ .
EUPHYTICA, 1996, 89 (01) :69-75
[8]   PLEIOTROPIC EFFECTS OF GENES FOR REDUCED HEIGHT (RHT) AND DAY-LENGTH INSENSITIVITY (PPD) ON YIELD AND ITS COMPONENTS FOR WHEAT GROWN IN MIDDLE EUROPE [J].
BORNER, A ;
WORLAND, AJ ;
PLASCHKE, J ;
SCHUMANN, E ;
LAW, CN .
PLANT BREEDING, 1993, 111 (03) :204-216
[9]   The Genetic Architecture of Maize Flowering Time [J].
Buckler, Edward S. ;
Holland, James B. ;
Bradbury, Peter J. ;
Acharya, Charlotte B. ;
Brown, Patrick J. ;
Browne, Chris ;
Ersoz, Elhan ;
Flint-Garcia, Sherry ;
Garcia, Arturo ;
Glaubitz, Jeffrey C. ;
Goodman, Major M. ;
Harjes, Carlos ;
Guill, Kate ;
Kroon, Dallas E. ;
Larsson, Sara ;
Lepak, Nicholas K. ;
Li, Huihui ;
Mitchell, Sharon E. ;
Pressoir, Gael ;
Peiffer, Jason A. ;
Rosas, Marco Oropeza ;
Rocheford, Torbert R. ;
Cinta Romay, M. ;
Romero, Susan ;
Salvo, Stella ;
Sanchez Villeda, Hector ;
da Silva, H. Sofia ;
Sun, Qi ;
Tian, Feng ;
Upadyayula, Narasimham ;
Ware, Doreen ;
Yates, Heather ;
Yu, Jianming ;
Zhang, Zhiwu ;
Kresovich, Stephen ;
McMullen, Michael D. .
SCIENCE, 2009, 325 (5941) :714-718
[10]   Precision phenotyping of biomass accumulation in triticale reveals temporal genetic patterns of regulation [J].
Busemeyer, Lucas ;
Ruckelshausen, Arno ;
Moeller, Kim ;
Melchinger, Albrecht E. ;
Alheit, Katharina V. ;
Maurer, Hans Peter ;
Hahn, Volker ;
Weissmann, Elmar A. ;
Reif, Jochen C. ;
Wuerschum, Tobias .
SCIENTIFIC REPORTS, 2013, 3