Lysinibacillus composti sp nov., isolated from compost
被引:10
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作者:
Hayat, Rifat
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Natl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Pir Mehr Ali Shah Arid Agr Univ, Dept Soil Sci, Rawalpindi 46300, Pakistan
Pir Mehr Ali Shah Arid Agr Univ, SWC, Rawalpindi 46300, Pakistan
Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1138657, JapanNatl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Hayat, Rifat
[1
,2
,3
,5
]
Ahmed, Iftikhar
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Natl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, PakistanNatl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Ahmed, Iftikhar
[1
]
Paek, Jayoung
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KRIBB, Korean Collect Type Cultures, Biol Resources Ctr, Taejon 305806, South KoreaNatl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Paek, Jayoung
[4
]
Sin, Yeseul
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KRIBB, Korean Collect Type Cultures, Biol Resources Ctr, Taejon 305806, South KoreaNatl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Sin, Yeseul
[4
]
Ehsan, Muhammad
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Natl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Pir Mehr Ali Shah Arid Agr Univ, Dept Soil Sci, Rawalpindi 46300, Pakistan
Pir Mehr Ali Shah Arid Agr Univ, SWC, Rawalpindi 46300, PakistanNatl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Ehsan, Muhammad
[1
,2
,3
]
Iqbal, Muhammad
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Natl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, PakistanNatl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Iqbal, Muhammad
[1
]
Yokota, Akira
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Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1138657, JapanNatl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Yokota, Akira
[5
]
Chang, Young H.
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KRIBB, Korean Collect Type Cultures, Biol Resources Ctr, Taejon 305806, South KoreaNatl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
Chang, Young H.
[4
]
机构:
[1] Natl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
[2] Pir Mehr Ali Shah Arid Agr Univ, Dept Soil Sci, Rawalpindi 46300, Pakistan
[3] Pir Mehr Ali Shah Arid Agr Univ, SWC, Rawalpindi 46300, Pakistan
[4] KRIBB, Korean Collect Type Cultures, Biol Resources Ctr, Taejon 305806, South Korea
[5] Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1138657, Japan
A Gram-negative, motile, rod-shaped, endospore-forming bacterial strain, designated as NCCP-36(T), was isolated from the compost of fruit and vegetable wastes. The strain NCCP-36(T) grew within a temperature range of 10-45 C-au < (optimum 28 C-au <) and a pH range of 6.5-8.5 (optimum 7.0), and its cells tolerated < 50 mM boron (optimum growth without boron) and 0-5 % NaCl (w/v) in tryptic soya broth medium. Based on comparative analysis of 16S rRNA gene sequence, strain NCCP-36(T) showed the highest similarity to Lysinibacillus sinduriensis BLB-1(T) (97.52 %) and L. xylanilyticus XDB9(T) (96.96 %), and < 97 % similarity with other closely related taxa. However, DNA-DNA relatedness between strain NCCP-36(T) and the closely related type strains of genus Lysinibacillus was a parts per thousand currency sign37 %. Phylogenetic and chemotaxonomic analyses [major polar lipids: diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, and phospholipids; predominant menaquinone: MK-7; major cellular fatty acids: iso-C-15:0, antieso-C-15:0, and iso-C-16:0; DNA G+C contents: 37 mol %; Lys-Asp (type A4 alpha) in cell-wall peptidoglycans as diagnostic amino acids] also support the affiliation of strain NCCP-36(T) to genus Lysinibacillus. Based upon DNA-DNA relatedness as well as distinctive chemotaxonomic, phylogenetic, and genotypic data, we conclude that strain NCCP-36(T) belongs to a novel species of genus Lysinibacillus, for which the name Lysinibacillus composti sp. nov. is proposed. The type strain is NCCP-36(T) (JCM 18777(T) = KCTC 13796(T) = DSMZ 24785(T)).
机构:
Guangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Lu, Qin
Yuan, Haoran
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机构:
Chinese Acad Sci, Guangzhou Inst Energy Convers, Guangzhou 510640, Guangdong, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Yuan, Haoran
Li, Jibing
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机构:
Guangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Shanghai Ocean Univ, Coll Food Sci & Technol, Shanghai 201306, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Li, Jibing
Zhao, Yong
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Shanghai Ocean Univ, Coll Food Sci & Technol, Shanghai 201306, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Zhao, Yong
Zhou, Shungui
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Guangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Zhou, Shungui
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,
2015,
107
(03):
: 813
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819
机构:
Korea Res Inst Biosci & Biotechnol, Environm Biotechnol Res Ctr, Taejon 305806, South KoreaKorea Res Inst Biosci & Biotechnol, Environm Biotechnol Res Ctr, Taejon 305806, South Korea
Jin, Long
Kim, Kwang Kyu
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Korea Res Inst Biosci & Biotechnol, Biol Resource Ctr, Korean Collect Type Cultures, Taejon 305806, South KoreaKorea Res Inst Biosci & Biotechnol, Environm Biotechnol Res Ctr, Taejon 305806, South Korea
Kim, Kwang Kyu
An, Kwang-Guk
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机构:
Chungnam Natl Univ, Coll Biol Sci & Biotechnol, Dept Biosci & Biotechnol, Taejon 305764, South KoreaKorea Res Inst Biosci & Biotechnol, Environm Biotechnol Res Ctr, Taejon 305806, South Korea
An, Kwang-Guk
Oh, Hee-Mock
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Korea Res Inst Biosci & Biotechnol, Environm Biotechnol Res Ctr, Taejon 305806, South KoreaKorea Res Inst Biosci & Biotechnol, Environm Biotechnol Res Ctr, Taejon 305806, South Korea
Oh, Hee-Mock
Lee, Sung-Taik
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Korea Adv Inst Sci & Technol, Dept Biol Sci, Taejon 305701, South KoreaKorea Res Inst Biosci & Biotechnol, Environm Biotechnol Res Ctr, Taejon 305806, South Korea
机构:
Guangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Sichuan Normal Univ, Chem & Mat Inst, Chengdu 610068, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Han, Luchao
Yang, Guiqin
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Guangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Yang, Guiqin
Zhou, Xuemei
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机构:
Minist Civil Affairs, Res Inst 101, Beijing 100070, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Zhou, Xuemei
Yang, Dehui
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机构:
Minist Civil Affairs, Res Inst 101, Beijing 100070, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Yang, Dehui
Hu, Pei
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机构:
Sichuan Normal Univ, Chem & Mat Inst, Chengdu 610068, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Hu, Pei
Lu, Qin
论文数: 0引用数: 0
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机构:
Guangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China
Lu, Qin
Zhou, Shungui
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Guangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R ChinaGuangdong Inst Ecoenvironm & Soil Sci, Guangzhou 510650, Guangdong, Peoples R China