Lysinibacillus composti sp nov., isolated from compost

被引:10
|
作者
Hayat, Rifat [1 ,2 ,3 ,5 ]
Ahmed, Iftikhar [1 ]
Paek, Jayoung [4 ]
Sin, Yeseul [4 ]
Ehsan, Muhammad [1 ,2 ,3 ]
Iqbal, Muhammad [1 ]
Yokota, Akira [5 ]
Chang, Young H. [4 ]
机构
[1] Natl Agr Res Ctr, Natl Culture Collect Pakistan, Natl Inst Genom & Adv Biotechnol, Islamabad 45500, Pakistan
[2] Pir Mehr Ali Shah Arid Agr Univ, Dept Soil Sci, Rawalpindi 46300, Pakistan
[3] Pir Mehr Ali Shah Arid Agr Univ, SWC, Rawalpindi 46300, Pakistan
[4] KRIBB, Korean Collect Type Cultures, Biol Resources Ctr, Taejon 305806, South Korea
[5] Univ Tokyo, Inst Mol & Cellular Biosci, Bunkyo Ku, Tokyo 1138657, Japan
关键词
Lysinibacillus composti sp nov; Compost; Cell-wall peptidoglycans; GEN; NOV; DEOXYRIBONUCLEIC-ACID; COMB; CELL-WALLS; BACILLUS; BACTERIUM; PROPOSAL; LYSINE; BORON; SOIL;
D O I
10.1007/s13213-013-0747-1
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
A Gram-negative, motile, rod-shaped, endospore-forming bacterial strain, designated as NCCP-36(T), was isolated from the compost of fruit and vegetable wastes. The strain NCCP-36(T) grew within a temperature range of 10-45 C-au < (optimum 28 C-au <) and a pH range of 6.5-8.5 (optimum 7.0), and its cells tolerated < 50 mM boron (optimum growth without boron) and 0-5 % NaCl (w/v) in tryptic soya broth medium. Based on comparative analysis of 16S rRNA gene sequence, strain NCCP-36(T) showed the highest similarity to Lysinibacillus sinduriensis BLB-1(T) (97.52 %) and L. xylanilyticus XDB9(T) (96.96 %), and < 97 % similarity with other closely related taxa. However, DNA-DNA relatedness between strain NCCP-36(T) and the closely related type strains of genus Lysinibacillus was a parts per thousand currency sign37 %. Phylogenetic and chemotaxonomic analyses [major polar lipids: diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, and phospholipids; predominant menaquinone: MK-7; major cellular fatty acids: iso-C-15:0, antieso-C-15:0, and iso-C-16:0; DNA G+C contents: 37 mol %; Lys-Asp (type A4 alpha) in cell-wall peptidoglycans as diagnostic amino acids] also support the affiliation of strain NCCP-36(T) to genus Lysinibacillus. Based upon DNA-DNA relatedness as well as distinctive chemotaxonomic, phylogenetic, and genotypic data, we conclude that strain NCCP-36(T) belongs to a novel species of genus Lysinibacillus, for which the name Lysinibacillus composti sp. nov. is proposed. The type strain is NCCP-36(T) (JCM 18777(T) = KCTC 13796(T) = DSMZ 24785(T)).
引用
收藏
页码:1081 / 1088
页数:8
相关论文
共 50 条
  • [1] Lysinibacillus composti sp. nov., isolated from compost
    Rifat Hayat
    Iftikhar Ahmed
    Jayoung Paek
    Yeseul Sin
    Muhammad Ehsan
    Muhammad Iqbal
    Akira Yokota
    Young H. Chang
    Annals of Microbiology, 2014, 64 : 1081 - 1088
  • [2] Brevibacillus composti sp. nov., isolated from hyperthermophilic compost
    Tang, Rong
    Zhang, Qi
    Ye, Yin
    Yang, Shang
    Fu, Tao
    Liu, Guo-Hong
    Zhou, Shun-Gui
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (11)
  • [3] Pedobacter composti sp nov., isolated from compost
    Lee, Hyung-Gwan
    Kim, Song-Gun
    Im, Wan-Taek
    Oh, Hee-Mock
    Lee, Sung-Taik
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2009, 59 : 345 - 349
  • [4] Olivibacter composti sp nov., isolated from compost collected at a greenhouse
    Lin, Shih-Yao
    Hameed, Asif
    Chiu, Kai-Yeh
    Liu, You-Cheng
    Hsu, Yi-Han
    Lai, Wei-An
    Young, Chiu-Chung
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2017, 67 (01) : 148 - 152
  • [5] Pseudoxanthomonas composti sp. nov., isolated from compost
    Lin, Jun
    Yang, Guiqin
    Tang, Jia
    Li, Zhen
    Yu, Zhen
    Zhuang, Li
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (08): : 1213 - 1219
  • [6] Planifilum composti sp nov., a thermophile isolated from compost
    Han, Song-Ih
    Lee, Jae-Chan
    Lee, Hyo-Jin
    Whang, Kyung-Sook
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2013, 63 : 4557 - 4561
  • [7] Pseudomonas composti sp nov., isolated from compost samples
    Gibello, Alicia
    Vela, Ana I.
    Martin, Margarita
    Mengs, Gerardo
    Alonso, Pilar Z.
    Garbi, Carlos
    Fernandez-Garayzabal, Jose F.
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2011, 61 : 2962 - 2966
  • [8] Lysinibacillus xyleni sp nov., isolated from a bottle of xylene
    Begum, Mulla Azmatunnisa
    Rahul, Kamidi
    Sasikala, Chintalapati
    Ramana, Chintalapati Venkata
    ARCHIVES OF MICROBIOLOGY, 2016, 198 (04) : 325 - 332
  • [9] Mesorhizobium composti sp. nov., isolated from compost
    Shih-Yao Lin
    Asif Hameed
    Yu-Ting Hsieh
    Chiu-Chung Young
    Antonie van Leeuwenhoek, 2019, 112 : 1387 - 1398
  • [10] Mesorhizobium composti sp. nov., isolated from compost
    Lin, Shih-Yao
    Hameed, Asif
    Hsieh, Yu-Ting
    Young, Chiu-Chung
    ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2019, 112 (09): : 1387 - 1398