The Amsterdam Ultra-high field adult lifespan database (AHEAD): A freely available multimodal 7 Tesla submillimeter magnetic resonance imaging database

被引：46

作者：

Alkemade, Anneke ^{[1
]}

Mulder, Martijn J. ^{[1
,3
]}

Groot, Josephine M. ^{[1
]}

Isaacs, Bethany R. ^{[1
,2
]}

van Berendonk, Nikita ^{[1
]}

Lute, Nicky ^{[1
,4
]}

Isherwood, Scott J. S. ^{[1
]}

Bazin, Pierre-Louis ^{[1
,5
]}

Forstmann, Birte U. ^{[1
]}

机构：

[1] Univ Amsterdam, Integrat Model Based Cognit Neurosci Res Unit, Nieuwe Achtergracht 129B,Room G3-08,Postbus 15926, NL-1001 NK Amsterdam, Netherlands

[2] Maastricht Univ, Dept Expt Neurosurg, Med Ctr, Maastricht, Netherlands

[3] Univ Utrecht, Psychol & Social Sci, Utrecht, Netherlands

[4] Vrije Univ, Clin Neuropsychol, Amsterdam, Netherlands

[5] Max Planck Inst Human Cognit & Brain Sci, Leipzig, Germany

来源：

NEUROIMAGE | 2020年 / 221卷

关键词：

Ultra-high field 7 Tesla structural MRI; Subcortex; Probabilistic maps; Basal ganglia; SEGMENTATION; MRI;

D O I：

10.1016/j.neuroimage.2020.117200

中图分类号：

Q189 [神经科学];

学科分类号：

071006 ;

摘要：

Normative databases allow testing of novel hypotheses without the costly collection of magnetic resonance imaging (MRI) data. Here we present the Amsterdam Ultra-high field adult lifespan database (AHEAD). The AHEAD consists of 105 7 Tesla (T) whole-brain structural MRI scans tailored specifically to imaging of the human subcortex, including both male and female participants and covering the entire adult life span (18-80 yrs). We used these data to create probability maps for the subthalamic nucleus, substantia nigra, internal and external segment of the globus pallidus, and the red nucleus. Data was acquired at a submillimeter resolution using a multi-echo (ME) extension of the second gradient-echo image of the MP2RAGE sequence (MP2RAGEME) sequence, resulting in complete anatomical alignment of quantitative, R-1-maps, R-2*-maps, T-1-maps, T-1-weighted images, T-2*-maps, and quantitative susceptibility mapping (QSM). Quantitative MRI maps, and derived probability maps of basal ganglia structures are freely available for further analyses.

引用

页数：7

共 37 条

[1] Estimating the reproducibility of psychological science [J].

Aarts, Alexander A. ;

Anderson, Joanna E. ;

Anderson, Christopher J. ;

Attridge, Peter R. ;

Attwood, Angela ;

Axt, Jordan ;

Babel, Molly ;

Bahnik, Stepan ;

Baranski, Erica ;

Barnett-Cowan, Michael ;

Bartmess, Elizabeth ;

Beer, Jennifer ;

Bell, Raoul ;

Bentley, Heather ;

Beyan, Leah ;

Binion, Grace ;

Borsboom, Denny ;

Bosch, Annick ;

Bosco, Frank A. ;

Bowman, Sara D. ;

Brandt, Mark J. ;

Braswell, Erin ;

Brohmer, Hilmar ;

Brown, Benjamin T. ;

Brown, Kristina ;

Bruening, Jovita ;

Calhoun-Sauls, Ann ;

Callahan, Shannon P. ;

Chagnon, Elizabeth ;

Chandler, Jesse ;

Chartier, Christopher R. ;

Cheung, Felix ;

Christopherson, Cody D. ;

Cillessen, Linda ;

Clay, Russ ;

Cleary, Hayley ;

Cloud, Mark D. ;

Cohn, Michael ;

Cohoon, Johanna ;

Columbus, Simon ;

Cordes, Andreas ;

Costantini, Giulio ;

Alvarez, Leslie D. Cramblet ;

Cremata, Ed ;

Crusius, Jan ;

DeCoster, Jamie ;

DeGaetano, Michelle A. ;

Della Penna, Nicolas ;

den Bezemer, Bobby ;

Deserno, Marie K. .

SCIENCE, 2015, 349 (6251)

[2] Do We Need a Human post mortem Whole-Brain Anatomical Ground Truth in in vivo Magnetic Resonance Imaging? [J].

Alkemade, Anneke ;

Groot, Josephine M. ;

Forstmann, Birte U. .

FRONTIERS IN NEUROANATOMY, 2018, 12

[3] Comparison of T2*-weighted and QSM contrasts in Parkinson's disease to visualize the STN with MRI [J].

Alkemade, Anneke ;

de Hollander, Gilles ;

Keuken, Max C. ;

Schaefer, Andreas ;

Ott, Derek V. M. ;

Schwarz, Johannes ;

Weise, David ;

Kotz, Sonja A. ;

Forstmann, Birte U. .

PLOS ONE, 2017, 12 (04)

[4] A perspective on terra incognita: uncovering the neuroanatomy of the human subcortex [J].

Alkemade, Anneke ;

Keuken, Max C. ;

Forstmann, Birte U. .

FRONTIERS IN NEUROANATOMY, 2013, 7

[5]

[Anonymous], 2013, MAGN RESON IMAGING, DOI DOI 10.1007/978-3-642-37824-9_3

[6] Age-related Iron Deposition in the Basal Ganglia: Quantitative Analysis in Healthy Subjects [J].

Aquino, Domenico ;

Bizzi, Alberto ;

Grisoli, Marina ;

Garavaglia, Barbara ;

Bruzzone, Maria Grazia ;

Nardocci, Nardo ;

Savoiardo, Mario ;

Chiapparini, Luisa .

RADIOLOGY, 2009, 252 (01) :165-172

[7] Symmetric diffeomorphic image registration with cross-correlation: Evaluating automated labeling of elderly and neurodegenerative brain [J].

Avants, B. B. ;

Epstein, C. L. ;

Grossman, M. ;

Gee, J. C. .

MEDICAL IMAGE ANALYSIS, 2008, 12 (01) :26-41

[8]

Bazin P.-L., 2020, ELIFE, V9, DOI 10.1101/2020.05.26.115865

[9] Denoising High-Field Multi-Dimensional MRI With Local Complex PCA [J].

Bazin, Pierre-Louis ;

Alkemade, Anneke ;

van der Zwaag, Wietske ;

Caan, Matthan ;

Mulder, Martijn ;

Forstmann, Birte U. .

FRONTIERS IN NEUROSCIENCE, 2019, 13

[10] A computational framework for ultra-high resolution cortical segmentation at 7 Tesla [J].

Bazin, Pierre-Louis ;

Weiss, Marcel ;

Dinse, Juliane ;

Schaefer, Andreas ;

Trampel, Robert ;

Turner, Robert .

NEUROIMAGE, 2014, 93 :201-209

← 1 2 3 4 →