Raman database of amino acids solutions: a critical study of Extended Multiplicative Signal Correction

被引:50
作者
Candeloro, Patrizio [1 ]
Grande, Elisabetta [1 ]
Raimondo, Raffaella [1 ]
Di Mascolo, Daniele [1 ]
Gentile, Francesco [1 ]
Coluccio, Maria Laura [1 ]
Perozziello, Gerardo [1 ]
Malara, Natalia [1 ,2 ]
Francardi, Marco [1 ]
Di Fabrizio, Enzo [1 ,3 ]
机构
[1] Magna Graecia Univ Catanzaro, Expt & Clin Med Dept, BioNEM Lab, I-88100 Catanzaro, Italy
[2] IIT, I-73010 Lecce, Italy
[3] KAUST, Phys Sci & Engn Div, Thuwal 239556900, Saudi Arabia
关键词
SURFACE-ENHANCED RAMAN; EXTRACTING BIOCHEMICAL INFORMATION; SINGLE-CELL RAMAN; SPECTROSCOPY; SPECTRA; SCATTERING; TISSUE; IDENTIFICATION; MICROSCOPY; MIXTURES;
D O I
10.1039/c3an01665j
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
The Raman spectra of biological materials always exhibit complex profiles, constituting several peaks and/or bands which arise due to the large variety of biomolecules. The extraction of quantitative information from these spectra is not a trivial task. While qualitative information can be retrieved from the changes in peaks frequencies or from the appearance/disappearance of some peaks, quantitative analysis requires an examination of peak intensities. Unfortunately in biological samples it is not easy to identify a reference peak for normalizing intensities, and this makes it very difficult to study the peak intensities. In the last decades a more refined mathematical tool, the extended multiplicative signal correction (EMSC), has been proposed for treating infrared spectra, which is also capable of providing quantitative information. From the mathematical and physical point of view, EMSC can also be applied to Raman spectra, as recently proposed. In this work the reliability of the EMSC procedure is tested by application to a well defined biological system: the 20 standard amino acids and their combination in peptides. The first step is the collection of a Raman database of these 20 amino acids, and subsequently EMSC processing is applied to retrieve quantitative information from amino acids mixtures and peptides. A critical review of the results is presented, showing that EMSC has to be carefully handled for complex biological systems.
引用
收藏
页码:7331 / 7340
页数:10
相关论文
共 26 条
[1]   Study of normal colorectal tissue by FT-Raman spectroscopy [J].
Andrade, P. O. ;
Bitar, R. A. ;
Yassoyama, K. ;
Martinho, H. ;
Santo, A. M. E. ;
Bruno, P. M. ;
Martin, A. A. .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2007, 387 (05) :1643-1648
[2]   Identification of Raman spectroscopic markers for the characterization of normal and adenocarcinomatous colonic tissues [J].
Beljebbar, A. ;
Bouche, O. ;
Diebold, M. D. ;
Guillou, P. J. ;
Palot, J. P. ;
Eudes, D. ;
Manfait, M. .
CRITICAL REVIEWS IN ONCOLOGY HEMATOLOGY, 2009, 72 (03) :255-264
[3]   Nanoparticle microinjection and Raman spectroscopy as tools for nanotoxicology studies [J].
Candeloro, Patrizio ;
Tirinato, Luca ;
Malara, Natalia ;
Fregola, Annalisa ;
Casals, Eudald ;
Puntes, Victor ;
Perozziello, Gerardo ;
Gentile, Francesco ;
Coluccio, Maria Laura ;
Das, Gobind ;
Liberale, Carlo ;
De Angelis, Francesco ;
Di Fabrizio, Enzo .
ANALYST, 2011, 136 (21) :4402-4408
[4]   Principal component analysis based methodology to distinguish protein SERS spectra [J].
Das, G. ;
Gentile, F. ;
Coluccio, M. L. ;
Perri, A. M. ;
Nicastri, A. ;
Mecarini, F. ;
Cojoc, G. ;
Candeloro, P. ;
Liberale, C. ;
De Angelis, F. ;
Di Fabrizio, E. .
JOURNAL OF MOLECULAR STRUCTURE, 2011, 993 (1-3) :500-505
[5]   Methods for extracting biochemical information from bacterial Raman spectra: Focus on a group of structurally similar biomolecules - Fatty acids [J].
De Gelder, Joke ;
De Gussem, Kris ;
Vandenabeele, Peter ;
Vancanneyt, Marc ;
De Vos, Paul ;
Moens, Luc .
ANALYTICA CHIMICA ACTA, 2007, 603 (02) :167-175
[6]   Reference database of Raman spectra of biological molecules [J].
De Gelder, Joke ;
De Gussem, Kris ;
Vandenabeele, Peter ;
Moens, Luc .
JOURNAL OF RAMAN SPECTROSCOPY, 2007, 38 (09) :1133-1147
[7]   Methods for extracting biochemical information from bacterial Raman spectra:: An explorative study on Cupriavidus metallidurans [J].
De Gelder, Joke ;
De Gussem, Kris ;
Vandenabeele, Peter ;
De Vos, Paul ;
Moens, Luc .
ANALYTICA CHIMICA ACTA, 2007, 585 (02) :234-240
[8]  
Filik J, 2007, ANALYST, V132, P544, DOI 10.1039/b701541k
[9]   Label-Free Biomedical Imaging with High Sensitivity by Stimulated Raman Scattering Microscopy [J].
Freudiger, Christian W. ;
Min, Wei ;
Saar, Brian G. ;
Lu, Sijia ;
Holtom, Gary R. ;
He, Chengwei ;
Tsai, Jason C. ;
Kang, Jing X. ;
Xie, X. Sunney .
SCIENCE, 2008, 322 (5909) :1857-1861
[10]   Protein secondary structure from deep-UV resonance Raman spectroscopy [J].
Huang, CY ;
Balakrishnan, G ;
Spiro, TG .
JOURNAL OF RAMAN SPECTROSCOPY, 2006, 37 (1-3) :277-282