Long non-coding RNA in health and disease

被引:230
作者
Maass, Philipp G. [1 ,2 ]
Luft, Friedrich C. [1 ,2 ]
Baehring, Sylvia [1 ,2 ]
机构
[1] Expt & Clin Res Ctr ECRC, D-13125 Berlin, Germany
[2] Max Delbruck Ctr Mol Med MDC, D-13125 Berlin, Germany
来源
JOURNAL OF MOLECULAR MEDICINE-JMM | 2014年 / 92卷 / 04期
关键词
Gene regulation; Chromatin loop; In cis; In trans; Histone code; Transcriptional regulation; Long non-coding RNA; lncRNA; CISTR-ACT; Chromosomal territories; Waddington; Boveri; X-INACTIVATION; POOR-PROGNOSIS; PROSTATE-CANCER; LUNG-CANCER; XIST RNA; GENE; CHROMATIN; EXPRESSION; TRANSCRIPTION; ANTISENSE;
D O I
10.1007/s00109-014-1131-8
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Long non-coding RNAs (lncRNAs) interact with the nuclear architecture and are involved in fundamental biological mechanisms, such as imprinting, histone-code regulation, gene activation, gene repression, lineage determination, and cell proliferation, all by regulating gene expression. Understanding the lncRNA regulation of transcriptional or post-transcriptional gene regulation expands our knowledge of disease. Several associations between altered lncRNA function and gene expression have been linked to clinical disease phenotypes. Early advances have been made in developing lncRNAs as biomarkers. Several mouse models reveal that human lncRNAs have very diverse functions. Their involvement in gene and genome regulation as well as disease underscores the importance of lncRNA-mediated regulatory networks. Because of their tissue-specific expression potential, their function as activators or repressors, and their selective targeting of genes, lncRNAs are of potential therapeutic interest. We review the regulatory mechanisms of lncRNAs, their major functional principles, and discuss their role in Mendelian disorders, cancer, cardiovascular disease, and neurological disorders.
引用
收藏
页码:337 / 346
页数:10
相关论文
共 122 条
[1]  
Arita T, 2013, ANTICANCER RES, V33, P3185
[2]   The long non-coding RNA Gomafu is acutely regulated in response to neuronal activation and involved in schizophrenia-associated alternative splicing [J].
Barry, G. ;
Briggs, J. A. ;
Vanichkina, D. P. ;
Poth, E. M. ;
Beveridge, N. J. ;
Ratnu, V. S. ;
Nayler, S. P. ;
Nones, K. ;
Hu, J. ;
Bredy, T. W. ;
Nakagawa, S. ;
Rigo, F. ;
Taft, R. J. ;
Cairns, M. J. ;
Blackshaw, S. ;
Wolvetang, E. J. ;
Mattick, J. S. .
MOLECULAR PSYCHIATRY, 2014, 19 (04) :486-494
[3]   Long Noncoding RNAs: Cellular Address Codes in Development and Disease [J].
Batista, Pedro J. ;
Chang, Howard Y. .
CELL, 2013, 152 (06) :1298-1307
[4]   The Intronic Long Noncoding RNA ANRASSF1 Recruits PRC2 to the RASSF1A Promoter, Reducing the Expression of RASSF1A and Increasing Cell Proliferation [J].
Beckedorff, Felipe C. ;
Ayupe, Ana C. ;
Crocci-Souza, Renan ;
Amaral, Murilo S. ;
Nakaya, Helder I. ;
Soltys, Daniela T. ;
Menck, Carlos F. M. ;
Reis, Eduardo M. ;
Verjovski-Almeida, Sergio .
PLOS GENETICS, 2013, 9 (08)
[5]   Histone modifications in transcriptional regulation [J].
Berger, SL .
CURRENT OPINION IN GENETICS & DEVELOPMENT, 2002, 12 (02) :142-148
[6]   The Spatial Organization of the Human Genome [J].
Bickmore, Wendy A. .
ANNUAL REVIEW OF GENOMICS AND HUMAN GENETICS, VOL 14, 2013, 14 :67-84
[7]   Going the distance: A current view of enhancer action [J].
Blackwood, EM ;
Kadonaga, JT .
SCIENCE, 1998, 281 (5373) :60-63
[8]   A GENE FROM THE REGION OF THE HUMAN X-INACTIVATION CENTER IS EXPRESSED EXCLUSIVELY FROM THE INACTIVE X-CHROMOSOME [J].
BROWN, CJ ;
BALLABIO, A ;
RUPERT, JL ;
LAFRENIERE, RG ;
GROMPE, M ;
TONLORENZI, R ;
WILLARD, HF .
NATURE, 1991, 349 (6304) :38-44
[9]   Expression of Linear and Novel Circular Forms of an INK4/ARF-Associated Non-Coding RNA Correlates with Atherosclerosis Risk [J].
Burd, Christin E. ;
Jeck, William R. ;
Liu, Yan ;
Sanoff, Hanna K. ;
Wang, Zefeng ;
Sharpless, Norman E. .
PLOS GENETICS, 2010, 6 (12) :1-15
[10]   Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses [J].
Cabili, Moran N. ;
Trapnell, Cole ;
Goff, Loyal ;
Koziol, Magdalena ;
Tazon-Vega, Barbara ;
Regev, Aviv ;
Rinn, John L. .
GENES & DEVELOPMENT, 2011, 25 (18) :1915-1927