Large Heterogeneity Observed in Single Molecule Measurements of Intramolecular Electron Transfer Rates through DNA

被引:4
作者
Fan, Shuya
Takada, Tadao [1 ,2 ]
Maruyama, Atsushi [3 ]
Fujitsuka, Mamoru [1 ]
Kawai, Kiyohiko [1 ]
机构
[1] Osaka Univ, SANKEN Inst Sci & Ind Res, 8-1 Mihogaoka, Ibaraki, Osaka 5670047, Japan
[2] Univ Hyogo, Grad Sch Engn, Dept Appl Chem, 2167 Shosha, Himeji, Hyogo 6712280, Japan
[3] Tokyo Inst Technol, Dept Life Sci & Technol, 4259 B-57 Nagatsuta,Midori Ku, Yokohama, Kanagawa 2268501, Japan
关键词
Electron transfer; Single molecule measurement; Blinking; LONG-RANGE ELECTRON; CHARGE-TRANSFER; HOLE-TRANSFER; DISTANCE; DYNAMICS; FLUORESCENCE; KINETICS; ENERGY; BASES;
D O I
10.1246/bcsj.20220220
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Current understanding of electron transfer (ET) kinetics is largely based on ensemble measurements that obscure the underlying single-molecule behavior. We previously reported systematic distance-dependent single molecule ET measure-ments that show a large heterogeneity. Here we study and dis-cuss this heterogeneity in more detail and suggest that it is a rather fundamental phenomenon that is difficult to explain solely by the distribution of DNA conformations. This hetero-geneity may arise from the uniqueness of each molecule, or it may reflect the uncertainty of ET kinetics.
引用
收藏
页码:1697 / 1702
页数:6
相关论文
共 40 条
[1]   Chemically-induced redox switching of a metalloprotein reveals thermodynamic and kinetic heterogeneity, one molecule at a time [J].
Akkilic, Namik ;
van der Grient, Fenna ;
Kamran, Muhammad ;
Sanghamitra, Nusrat J. M. .
CHEMICAL COMMUNICATIONS, 2014, 50 (93) :14523-14526
[2]   Long-range electron and excitation energy transfer in donor-bridge-acceptor systems [J].
Albinsson, Bo ;
Martensson, Jerker .
JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY C-PHOTOCHEMISTRY REVIEWS, 2008, 9 (03) :138-155
[3]   Luminescence quenching of ruthenium(II)-tris(phenanthroline) by cobalt(III)-tris(phenanthroline) bound to the surface of starburst dendrimers [J].
ben-Avraham, D ;
Schulman, LS ;
Bossmann, SH ;
Turro, C ;
Turro, NJ .
JOURNAL OF PHYSICAL CHEMISTRY B, 1998, 102 (26) :5088-5093
[4]   Molecular-wire behaviour in p-phenylenevinylene oligomers [J].
Davis, WB ;
Svec, WA ;
Ratner, MA ;
Wasielewski, MR .
NATURE, 1998, 396 (6706) :60-63
[5]   Distance-dependent activation energies for hole injection from protonated 9-amino-6-chloro-2-methoxyacridine into duplex DNA [J].
Davis, WB ;
Hess, S ;
Naydenova, I ;
Haselsberger, R ;
Ogrodnik, A ;
Newton, MD ;
Michel-Beyerle, ME .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2002, 124 (11) :2422-2423
[6]   Visualizing transient low-populated structures of RNA [J].
Dethoff, Elizabeth A. ;
Petzold, Katja ;
Chugh, Jeetender ;
Casiano-Negroni, Anette ;
Al-Hashimi, Hashim M. .
NATURE, 2012, 491 (7426) :724-+
[7]   SEMICONDUCTIVITY OF ORGANIC SUBSTANCES .9. NUCLEIC ACID IN DRY STATE [J].
ELEY, DD ;
SPIVEY, DI .
TRANSACTIONS OF THE FARADAY SOCIETY, 1962, 58 (470) :411-+
[8]   Electron-transfer kinetics through nucleic acids untangled by single-molecular fluorescence [J].
Fan, Shuya ;
Xu, Jie ;
Osakada, Yasuko ;
Hashimoto, Katsunori ;
Takayama, Kazuya ;
Natsume, Atsushi ;
Hirano, Masaki ;
Maruyama, Atsushi ;
Fujitsuka, Mamoru ;
Kawai, Kumi ;
Kawai, Kiyohiko .
CHEM, 2022, 8 (11) :3109-+
[9]   Architecture of the photosynthetic oxygen-evolving center [J].
Ferreira, KN ;
Iverson, TM ;
Maghlaoui, K ;
Barber, J ;
Iwata, S .
SCIENCE, 2004, 303 (5665) :1831-1838
[10]   The roles of structural dynamics in the cellular functions of RNAs [J].
Ganser, Laura R. ;
Kelly, Megan L. ;
Herschlag, Daniel ;
Al-Hashimi, Hashim M. .
NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2019, 20 (08) :474-489