An Explainable Artificial Intelligence Predictor for Early Detection of Sepsis

被引:61
作者
Yang, Meicheng [1 ]
Liu, Chengyu [1 ]
Wang, Xingyao [1 ]
Li, Yuwen [1 ]
Gao, Hongxiang [1 ]
Liu, Xing [2 ]
Li, Jianqing [1 ,3 ]
机构
[1] Southeast Univ, State Key Lab Bioelect, Sch Instrument Sci & Engn, Nanjing, Peoples R China
[2] Cent South Univ, Xiangya Hosp 3, Dept Anesthesiol, Changsha, Peoples R China
[3] Nanjing Med Univ, Sch Biomed Engn & Informat, Nanjing, Peoples R China
基金
中国国家自然科学基金;
关键词
artificial intelligence; intensive care unit; PhysioNet challenge; prediction; sepsis;
D O I
10.1097/CCM.0000000000004550
中图分类号
R4 [临床医学];
学科分类号
1002 ; 100602 ;
摘要
Objectives: Early detection of sepsis is critical in clinical practice since each hour of delayed treatment has been associated with an increase in mortality due to irreversible organ damage. This study aimed to develop an explainable artificial intelligence model for early predicting sepsis by analyzing the electronic health record data from ICU provided by the PhysioNet/Computing in Cardiology Challenge 2019. Design: Retrospective observational study. Setting: We developed our model on the shared ICUs publicly data and verified on the full hidden populations for challenge scoring. Patients: Public database included 40,336 patients' electronic health records sourced from Beth Israel Deaconess Medical Center (hospital system A) and Emory University Hospital (hospital system B). A total of 24,819 patients from hospital systems A, B, and C (an unidentified hospital system) were sequestered as full hidden test sets. Interventions: None. Measurements and Main Results: A total of 168 features were extracted on hourly basis. Explainable artificial intelligence sepsis predictor model was trained to predict sepsis in real time. Impact of each feature on hourly sepsis prediction was explored in-depth to show the interpretability. The algorithm demonstrated the final clinical utility score of 0.364 in this challenge when tested on the full hidden test sets, and the scores on three separate test sets were 0.430, 0.422, and -0.048, respectively. Conclusions: Explainable artificial intelligence sepsis predictor model achieves superior performance for predicting sepsis risk in a real-time way and provides interpretable information for understanding sepsis risk in ICU.
引用
收藏
页码:E1091 / E1096
页数:6
相关论文
共 23 条
[1]  
[Anonymous], 2018, Sepsis
[2]   A computational approach to early sepsis detection [J].
Calvert, Jacob S. ;
Price, Daniel A. ;
Chettipally, Uli K. ;
Barton, Christopher W. ;
Feldman, Mitchell D. ;
Hoffman, Jana L. ;
Jay, Melissa ;
Das, Ritankar .
COMPUTERS IN BIOLOGY AND MEDICINE, 2016, 74 :69-73
[3]   XGBoost: A Scalable Tree Boosting System [J].
Chen, Tianqi ;
Guestrin, Carlos .
KDD'16: PROCEEDINGS OF THE 22ND ACM SIGKDD INTERNATIONAL CONFERENCE ON KNOWLEDGE DISCOVERY AND DATA MINING, 2016, :785-794
[4]  
Du JA, 2019, P 2019 COMP CARD CIN
[5]   A Machine Learning Algorithm to Predict Severe Sepsis and Septic Shock: Development, Implementation, and Impact on Clinical Practice* [J].
Giannini, Heather M. ;
Ginestra, Jennifer C. ;
Chivers, Corey ;
Draugelis, Michael ;
Hanish, Asaf ;
Schweickert, William D. ;
Fuchs, Barry D. ;
Meadows, Laurie ;
Lynch, Michael ;
Donnelly, Patrick J. ;
Pavan, Kimberly ;
Fishman, Neil O. ;
Hanson, C. William, III ;
Umscheid, Craig A. .
CRITICAL CARE MEDICINE, 2019, 47 (11) :1485-1492
[6]   Clinician Perception of a Machine Learning-Based Early Warning System Designed to Predict Severe Sepsis and Septic Shock* [J].
Ginestra, Jennifer C. ;
Giannini, Heather M. ;
Schweickert, William D. ;
Meadows, Laurie ;
Lynch, Michael J. ;
Pavan, Kimberly ;
Chivers, Corey J. ;
Draugelis, Michael ;
Donnelly, Patrick J. ;
Fuchs, Barry D. ;
Umscheid, Craig A. .
CRITICAL CARE MEDICINE, 2019, 47 (11) :1477-1484
[7]   A targeted real-time early warning score (TREWScore) for septic shock [J].
Henry, Katharine E. ;
Hager, David N. ;
Pronovost, Peter J. ;
Saria, Suchi .
SCIENCE TRANSLATIONAL MEDICINE, 2015, 7 (299)
[8]   Learning representations for the early detection of sepsis with deep neural networks [J].
Kam, Hye Jin ;
Kim, Ha Young .
COMPUTERS IN BIOLOGY AND MEDICINE, 2017, 89 :248-255
[9]   The Timing of Early Antibiotics and Hospital Mortality in Sepsis [J].
Liu, Vincent X. ;
Fielding-Singh, Vikram ;
Greene, John D. ;
Baker, Jennifer M. ;
Iwashyna, Theodore J. ;
Bhattacharya, Jay ;
Escobar, Gabriel J. .
AMERICAN JOURNAL OF RESPIRATORY AND CRITICAL CARE MEDICINE, 2017, 196 (07) :856-863
[10]  
Lundberg SM, 2017, ADV NEUR IN, V30