Quantitative structure-activity relationship analysis of some recently synthesized thiourea derivatives was studied for their cytotoxicity data (CC50) in MT-4 cells. The statistically significant 2D-QSAR model-1 (r(2) = 0.964, r(CV)(2) = 0.943 and r(-pred)(2) = 0.961) constructed by genetic function approximation (GFA) methodology was obtained when the number of descriptors was set to 4, indicating that the descriptors of the lowest unoccupied orbital energy (LUMO), radius of gyration (RadOfGyration) and E-state indices (S_ssCH2 and S_aaCH) crucially contributed to biological activity. The validation of the model was done by full cross-validation tests, randomization tests and external test set prediction. Molecular field analysis (MFA) on the corresponding training set investigated the substitutional requirements for the favorable receptor-drug interaction using genetic partial least squares (G/PLS) method, showing that both steric and electrostatic fields play a major role in determining activity. The results derived by combining both methodologies may be useful in further prediction of cytotoxity data (CC50) of corresponding anti-HIV drugs.
机构:
Duke Univ, Med Ctr, Ctr Study Aging & Human Dev, Dept Pharmacol & Canc Biol, Durham, NC 27710 USAUniv Utah, Sch Med, Dept Pathol, Div Cellular Biol & Immunol, Salt Lake City, UT 84132 USA
Andersen, Joshua L.
;
Le Rouzic, Erwann
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Univ Paris 05, Inst Cochin, CNRS, UMR 8104, Paris, France
INSERM, U567, Paris, FranceUniv Utah, Sch Med, Dept Pathol, Div Cellular Biol & Immunol, Salt Lake City, UT 84132 USA
Le Rouzic, Erwann
;
Planelles, Vicente
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Univ Utah, Sch Med, Dept Pathol, Div Cellular Biol & Immunol, Salt Lake City, UT 84132 USAUniv Utah, Sch Med, Dept Pathol, Div Cellular Biol & Immunol, Salt Lake City, UT 84132 USA
机构:
Duke Univ, Med Ctr, Ctr Study Aging & Human Dev, Dept Pharmacol & Canc Biol, Durham, NC 27710 USAUniv Utah, Sch Med, Dept Pathol, Div Cellular Biol & Immunol, Salt Lake City, UT 84132 USA
Andersen, Joshua L.
;
Le Rouzic, Erwann
论文数: 0引用数: 0
h-index: 0
机构:
Univ Paris 05, Inst Cochin, CNRS, UMR 8104, Paris, France
INSERM, U567, Paris, FranceUniv Utah, Sch Med, Dept Pathol, Div Cellular Biol & Immunol, Salt Lake City, UT 84132 USA
Le Rouzic, Erwann
;
Planelles, Vicente
论文数: 0引用数: 0
h-index: 0
机构:
Univ Utah, Sch Med, Dept Pathol, Div Cellular Biol & Immunol, Salt Lake City, UT 84132 USAUniv Utah, Sch Med, Dept Pathol, Div Cellular Biol & Immunol, Salt Lake City, UT 84132 USA