Identification of immune-related biomarkers in adrenocortical carcinoma Immune-related biomarkers for ACC

被引:6
|
作者
Peng, Yun [1 ]
Song, Yuxuan [2 ]
Ding, Jin [3 ]
Li, Nan [1 ]
Zhang, Zheyu [1 ]
Wang, Haitao [4 ]
机构
[1] Tianjin Med Univ, Dept Urol, Hosp 2, Tianjin 300000, Peoples R China
[2] Tianjin Med Univ, Dept Urol, Gen Hosp, Tianjin 300000, Peoples R China
[3] Cent South Univ, Xiangya Hosp 2, Dept Metab & Endocrinol, Changsha 410011, Hunan, Peoples R China
[4] Tianjin Med Univ, Dept Oncol, Hosp 2, Pingjiang Rd, Tianjin 300000, Peoples R China
基金
中国国家自然科学基金;
关键词
Adrenocortical carcinoma; Tumor microenvironment; Immune; Biomarker; Prognosis; WGCNA; CELLS; SURVIVAL; GENES;
D O I
10.1016/j.intimp.2020.106930
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Emerging evidence has suggested that the tumor microenvironment, including immune infiltration, plays a crucially important role in tumor progression. Nevertheless, limited studies have been conducted on this topic in adrenocortical carcinoma. The present study aimed to explore the immune-related biomarkers in adrenocortical carcinoma. CIBERSORT was used to estimate the abundances of 22 kinds of immune cells, and univariable Cox analysis was performed to find survival-related immune cells with both Overall Survival (OS) and Progression-Free Interval (PFI). DESeq2 was applied to find differentially expressed genes between adrenocortical carcinoma and normal control samples; subsequently, weighted correlation network analysis and protein-protein interaction (PPI) network analysis were conducted to identify immune-related hub genes. xCell, TISIDB, and MsigDB were searched to validate the immune associations of hub genes. Eventually, univariable Cox and Kaplan-Meier analysis were used to assess the prognostic implications of the hub gene with the GEO database. Consequently, we identified two hub immune-related genes (ERN1, CEP55), GSEA revealed that both were mainly involved in tumor progression and immune response. ROC analysis indicated that ERN1 can accurately predict the 1-, 3-, and 5-year PFI, and CEP55 had the best performance for the prediction of both OS and PFI compared with other traits. Univariable Cox and Kaplan-Meier analysis showed that both genes have a significant effect on prognosis. Furthermore, both hub genes were validated in GEO datasets. The hub genes can provide better insights into tumor microenvironment and serve as potential biomarkers for immunotherapy in adrenocortical carcinoma.
引用
收藏
页数:11
相关论文
共 50 条
  • [21] Identification and validation of immune-related methylated genes as diagnostic and prognostic biomarkers of nasopharyngeal carcinoma
    Zou, Zhenning
    Li, Rujia
    Huang, Xueshan
    Chen, Mei
    Tan, Jingyi
    Wu, Minhua
    HEAD AND NECK-JOURNAL FOR THE SCIENCES AND SPECIALTIES OF THE HEAD AND NECK, 2024, 46 (01): : 192 - 211
  • [22] Identification of immune-related biomarkers and construction of regulatory network in patients with atherosclerosis
    Dong, Ruoyu
    Jiang, Guangwei
    Tian, Yunjie
    Shi, Xiaoming
    BMC MEDICAL GENOMICS, 2022, 15 (01)
  • [23] Identification of Immune-Related Genes as Potential Biomarkers in Early Septic Shock
    Liu, Beibei
    Fan, Yonghua
    Zhang, Xianjing
    Li, Huaqing
    Gao, Fei
    Shang, Wenli
    Hu, Juntao
    Tang, Zhanhong
    INTERNATIONAL ARCHIVES OF ALLERGY AND IMMUNOLOGY, 2024, : 264 - 279
  • [24] Identification of immune-related biomarkers and construction of regulatory network in patients with atherosclerosis
    Ruoyu Dong
    Guangwei Jiang
    Yunjie Tian
    Xiaoming Shi
    BMC Medical Genomics, 15
  • [25] The effect of clozapine on immune-related biomarkers in schizophrenia patients
    Shao, Lu
    Li, Yu
    Yuan, Zhiyao
    Guo, Xiyu
    Zeng, Guoji
    Liu, Junpeng
    BRAIN RESEARCH BULLETIN, 2024, 218
  • [26] Identification and Analysis of Immune-Related Gene Signature in Hepatocellular Carcinoma
    Shen, Bingbing
    Zhang, Guanqi
    Liu, Yunxun
    Wang, Jianguo
    Jiang, Jianxin
    GENES, 2022, 13 (10)
  • [27] Bioinformatics-based identification of lipid- and immune-related biomarkers in abdominal aortic aneurysms
    Li, Yuejin
    Li, Rougang
    Guo, Shikui
    Li, Yu
    Wang, Yongzhi
    Wen, Xin
    Lan, Tian
    Gong, Kunmei
    HELIYON, 2023, 9 (02)
  • [28] Machine learning to identify immune-related biomarkers of rheumatoid arthritis based on WGCNA network
    Chen, Yulan
    Liao, Ruobing
    Yao, Yuxin
    Wang, Qiao
    Fu, Lingyu
    CLINICAL RHEUMATOLOGY, 2022, 41 (04) : 1057 - 1068
  • [29] Identification of an Immune-Related Prognostic Predictor in Hepatocellular Carcinoma
    Wu, Lei
    Quan, Wen
    Luo, Qiong
    Pan, Ying
    Peng, Dongxu
    Zhang, Guihai
    FRONTIERS IN MOLECULAR BIOSCIENCES, 2020, 7
  • [30] Identification and analysis of immune-related subtypes of hepatocellular carcinoma
    Wang, Qimeng
    Huang, Jin
    Zhang, Huihua
    Liu, Huan
    Yu, Min
    EXPERIMENTAL BIOLOGY AND MEDICINE, 2021, 246 (06) : 667 - 677