The complete chloroplast genome sequence of Malus prattii (Rosaceae) and its phylogenetic analysis

被引：4

作者：

Fan, Lu ^{[1
]}

Qin, Ling ^{[1
]}

Yan, Jie ^{[1
]}

Mo, Chuanyuan ^{[1
]}

Rong, Chunxiao ^{[1
]}

Meng, Ying ^{[2
]}

Zhang, Manrang ^{[1
]}

机构：

[1] Northwest A&F Univ, Coll Hort, Yangling, Shaanxi, Peoples R China

[2] Forestry Bur Luonan Cty, Shangluo, Shaanxi, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期

关键词：

Malus prattii; chloroplast genome; Rosaceae; phylogenetic analysis;

D O I：

10.1080/23802359.2019.1623732

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

Malus prattii (Rosaceae) is an endemic species to China. Here, the complete chloroplast genome of M. prattii was obtained by using Illumina pair-end sequencing. The M. prattii complete chloroplast genome was 160,239 bp in length, containing a large single-copy region (LSC) of 88,355 bp and a small single-copy region (SSC) of 19,176 bp, which were separated by a pair of inverted repeat regions (IRs) of 26,354 bp. The chloroplast genome of Malus prattii contained 112 unique functional genes, including 78 protein-coding genes, 30 tRNA genes, and 4 rRNA genes. The overall C + G content of the whole genome was 36.5%. A neighbour-joining phylogenetic analysis suggested a close relationship between M. prattii and M. micromalus.

引用

页码：2171 / 2172

页数：2

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