The Pseudomonas aeruginosa Population among Cystic Fibrosis Patients in Quebec, Canada: a Disease Hot Spot without Known Epidemic Isolates

被引:2
作者
Jeukens, Julie [1 ]
Freschi, Luca [1 ]
Kukavica-Ibrulj, Irena [1 ]
Emond-Rheault, Jean-Guillaume [1 ]
Allard, Christian [2 ]
Barbeau, Jean [3 ]
Cantin, Andre [4 ]
Charette, Steve J. [1 ,5 ]
Deziel, Eric [6 ]
Malouin, Francois [4 ]
Milot, Julie [5 ]
Dao Nguyen [7 ]
Popa, Clara [8 ]
Boyle, Brian [1 ]
Levesque, Roger C. [1 ]
机构
[1] Univ Laval, Inst Integrat & Syst Biol IBIS, Quebec City, PQ, Canada
[2] CSSS Chicoutimi, Chicoutimi, PQ, Canada
[3] Univ Montreal, Montreal, PQ, Canada
[4] Univ Sherbrooke, Sherbrooke, PQ, Canada
[5] IUCPQ, Quebec City, PQ, Canada
[6] INRS Inst Armand Frappier, Laval, PQ, Canada
[7] McGill Univ, Montreal, PQ, Canada
[8] Hop Rouyn Noranda, Ctr Integre Sante & Serv Sociaux Abitibi Temiscam, Rouyn Noranda, PQ, Canada
关键词
Pseudomonas aeruginosa; clonal strains; cystic fibrosis; epidemic strains; genomes; genomics; molecular epidemiology; CLINICAL-OUTCOMES; CFTR MUTATIONS; INFECTION; STRAINS; ADULTS;
D O I
10.1128/JCM.02019-18
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
引用
收藏
页数:3
相关论文
共 21 条
[1]   Infection With Transmissible Strains of Pseudomonas aeruginosa and Clinical Outcomes in Adults With Cystic Fibrosis [J].
Aaron, Shawn D. ;
Vandemheen, Katherine L. ;
Ramotar, Karam ;
Giesbrecht-Lewis, Tracy ;
Tullis, Elizabeth ;
Freitag, Andreas ;
Paterson, Nigel ;
Jackson, Mary ;
Lougheed, M. Diane ;
Dowson, Christopher ;
Kumar, Vijay ;
Ferris, Wendy ;
Chan, Francis ;
Doucette, Steve ;
Fergusson, Dean .
JAMA-JOURNAL OF THE AMERICAN MEDICAL ASSOCIATION, 2010, 304 (19) :2145-2153
[2]  
DAIGNEAULT J, 1992, HUM BIOL, V64, P115
[3]   The Pseudomonas aeruginosa Pan-Genome Provides New Insights on Its Population Structure, Horizontal Gene Transfer, and Pathogenicity [J].
Freschi, Luca ;
Vincent, Antony T. ;
Jeukens, Julie ;
Emond-Rheault, Jean-Guillaume ;
Kukavica-Ibrulj, Irena ;
Dupont, Marie-Josee ;
Charette, Steve J. ;
Boyle, Brian ;
Levesque, Roger C. .
GENOME BIOLOGY AND EVOLUTION, 2019, 11 (01) :109-120
[4]   Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium [J].
Freschi, Luca ;
Jeukens, Julie ;
Kukavica-Ibrulj, Irene ;
Boyle, Brian ;
Dupont, Marie-Josee ;
Laroche, Jerome ;
Larose, Stephane ;
Maaroufi, Halim ;
Fothergill, Joanne L. ;
Moore, Matthew ;
Winsor, Geoffrey L. ;
Aaron, Shawn D. ;
Barbeau, Jean ;
Bell, Scott C. ;
Burns, Jane L. ;
Camara, Miguel ;
Cantin, Andre ;
Charette, Steve J. ;
Dewar, Ken ;
Deziel, Eric ;
Grimwood, Keith ;
Hancock, Robert E. W. ;
Harrison, Joe J. ;
Heebs, Stephan ;
Jelsbak, Lars ;
Jia, Baofeng ;
Kenna, Dervla T. ;
Kidd, Timothy J. ;
Klockgether, Jens ;
Lam, Joseph S. ;
Lamont, Iain L. ;
Lewenza, Shawn ;
Loman, Nick ;
Malouin, Francois ;
Manos, Jim ;
McArthur, Andrew G. ;
McKeown, Josie ;
Milot, Julie ;
Naghra, Hardeep ;
Nguyen, Dao ;
Pereira, Sheldon K. ;
Perron, Gabriel G. ;
Pirnay, Jean-Paul ;
Rainey, Paul B. ;
Rousseau, Simon ;
Santos, Pedro M. ;
Stephenson, Anne ;
Taylor, Veronique ;
Turton, Jane F. ;
Waglechner, Nicholas .
FRONTIERS IN MICROBIOLOGY, 2015, 6
[5]   SRST2: Rapid genomic surveillance for public health and hospital microbiology labs [J].
Inouye, Michael ;
Dashnow, Harriet ;
Raven, Lesley-Ann ;
Schultz, Mark B. ;
Pope, Bernard J. ;
Tomita, Takehiro ;
Zobel, Justin ;
Holt, Kathryn E. .
GENOME MEDICINE, 2014, 6
[6]   Genomics of antibiotic-resistance prediction in Pseudomonas aeruginosa [J].
Jeukens, Julie ;
Freschi, Luca ;
Kukavica-Ibrulj, Irena ;
Emond-Rheault, Jean-Guillaume ;
Tucker, Nicholas P. ;
Levesque, Roger C. .
ANNALS OF THE NEW YORK ACADEMY OF SCIENCES, 2019, 1435 (01) :5-17
[7]   A Pan-Genomic Approach to Understand the Basis of Host Adaptation in Achromobacter [J].
Jeukens, Julie ;
Freschi, Luca ;
Vincent, Antony T. ;
Emond-Rheault, Jean-Guillaume ;
Kukavica-Ibrulj, Irena ;
Charette, Steve J. ;
Levesque, Roger C. .
GENOME BIOLOGY AND EVOLUTION, 2017, 9 (04) :1030-1046
[8]   BIGSdb: Scalable analysis of bacterial genome variation at the population level [J].
Jolley, Keith A. ;
Maiden, Martin C. J. .
BMC BIOINFORMATICS, 2010, 11
[9]   The social network of cystic fibrosis centre care and shared Pseudomonas aeruginosa strain infection: a cross-sectional analysis [J].
Kidd, Timothy J. ;
Magalhaes, Ricardo J. Soares ;
Paynter, Stuart ;
Bell, Scott C. .
LANCET RESPIRATORY MEDICINE, 2015, 3 (08) :640-650
[10]   Pseudomonas aeruginosa Exhibits Frequent Recombination, but Only a Limited Association between Genotype and Ecological Setting [J].
Kidd, Timothy J. ;
Ritchie, Stephen R. ;
Ramsay, Kay A. ;
Grimwood, Keith ;
Bell, Scott C. ;
Rainey, Paul B. .
PLOS ONE, 2012, 7 (09)