Draft genome and description of Aeromicrobium phoceense strain Marseille-Q0843T sp. nov., a new bacterium isolated from human healthy skin

被引:2
作者
Boxberger, M. [1 ,2 ]
Ben Khedher, M. [1 ,2 ]
Magnien, S. [1 ,2 ]
Cassir, N. [1 ,2 ]
La Scola, B. [1 ,2 ]
机构
[1] Aix Marseille Univ, IRD, AP HM, MEPHI, Marseille, France
[2] IHU Mediterranee Infect, Marseille, France
关键词
Aeromicrobium; culturomics; genome; sp; nov; taxonogenomics; CULTUROMICS; ALGORITHM; SOIL;
D O I
10.1016/j.nmni.2020.100809
中图分类号
R51 [传染病];
学科分类号
100401 ;
摘要
In 2019, by culturing a skin swab sample from the back of the hand of a 61-year-old healthy woman and assessing it via the culturomics method, we isolated the new bacterial strain Marseille-Q0843(T) (= CSUR-Q0843). Matrix-assisted desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) failed to identify this isolate. Analysis of the 16S ribosomal RNA gene and genome-to-genome comparison suggested that this taxon belongs to a novel bacterial species within the family in Nocardioidaceae in the phylum Actinobacteria. We describe here the main phenotypic characteristics, genome sequence and annotation of Aeromicrobium phoceense strain Marseille-Q0843(T), a new member of the Aeromicrobium genus, which we propose as the type strain. (C) 2020 The Authors. Published by Elsevier Ltd.
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