DNA barcoding of coral reef fishes from Chuuk State, Micronesia

被引:3
作者
Choi, Jae Ho [1 ,2 ]
Jeong, Da Geum [2 ]
Oh, Ji Na [2 ]
Kim, Sung [1 ,2 ]
Lee, Youn Ho [1 ,2 ]
UngChoi, Young [2 ]
Myoung, Jung Goo [1 ,3 ]
Kim, Choong Gon [1 ,2 ]
机构
[1] Korea Maritime & Ocean Univ, Dept Convergence Study Ocean Sci & Technol, Ocean Sci & Technol Sch, Busan 49112, South Korea
[2] Korea Inst Ocean Sci & Technol, Marine Ecosyst Res Ctr, Busan 49111, South Korea
[3] Korea Inst Ocean Sci & Technol, Marine Bioresources Res Unit, Busan, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 03期
关键词
Coral reef fish; mitochondrial DNA COI; DNA barcode; identification; Chuuk State; Micronesia; CLIMATE-CHANGE; EVOLUTION;
D O I
10.1080/23802359.2020.1831981
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The fish diversity of Chuuk Micronesia is currently under threat due to rapid changes in the coral reef ecosystem. Thus, accurate fish identification using DNA barcodes is fundamental for exploring species biodiversity and resource protection. In this study, we analyzed 162 fish mitochondrial DNA cytochrome c oxidase I (COI) barcodes from Chuuk Micronesia. Consequently, we identified 95 species from 53 genera in 26 families and seven orders. The average Kimura 2-parameter genetic distances within species, genera, families, and orders were calculated as 0.17%, 11.78%, 15.63%, and 21.90%, respectively. Also, we have utilized DNA barcodes to perform genetic divergence and phylogenetic analysis of families recognized as dominant groups in Chuuk State. Our findings confirm that DNA barcodes using COI are an effective approach in identifying coral reef fish species. We anticipate that the results of this study will provide baseline data for the protection of coral reef fish biodiversity at Chuuk Micronesia.
引用
收藏
页码:3733 / 3738
页数:6
相关论文
共 30 条
[1]   DNA barcoding of fishes from Lake Lanao, Philippines [J].
Abdulmalik-Labe, Onaya P. ;
Quilang, Jonas P. .
MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (01) :1890-1894
[2]  
Andrefouet S., 2005, P 10 INT COR REEF S, P1732
[3]   Climate change and coral reef bleaching: An ecological assessment of long-term impacts, recovery trends and future outlook [J].
Baker, Andrew C. ;
Glynn, Peter W. ;
Riegl, Bernhard .
ESTUARINE COASTAL AND SHELF SCIENCE, 2008, 80 (04) :435-471
[4]  
BIRKY CW, 1989, GENETICS, V121, P613
[5]   RAPID EVOLUTION OF ANIMAL MITOCHONDRIAL-DNA [J].
BROWN, WM ;
GEORGE, M ;
WILSON, AC .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1979, 76 (04) :1967-1971
[6]  
Caterino MS, 2001, SYST BIOL, V50, P106, DOI 10.1080/10635150119988
[7]   Towards integrative taxonomy [J].
Dayrat, B .
BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, 2005, 85 (03) :407-415
[8]  
Edward, 2002, MARINE BIODIVERSITY, P1
[9]  
Hebert Paul D. N., 2003, Proceedings of the Royal Society Biological Sciences Series B, V270, pS96
[10]   The promise of DNA barcoding for taxonomy [J].
Hebert, PDN ;
Gregory, TR .
SYSTEMATIC BIOLOGY, 2005, 54 (05) :852-859