Pan-cancer analysis of somatic mutations across 21 neuroendocrine tumor types

被引:7
作者
Cao, Yanan [1 ,2 ]
Zhou, Weiwei [1 ]
Li, Lin [1 ]
Wang, Jiaqian [3 ]
Gao, Zhibo [3 ]
Jiang, Yiran [1 ]
Jiang, Xiuli [1 ]
Shan, Aijing [1 ]
Bailey, Matthew H. [4 ,5 ]
Huang, Kuan-Lin [4 ,5 ]
Sun, Sam Q. [4 ,5 ]
McLellan, Michael D. [4 ]
Niu, Beifang [4 ,6 ]
Wang, Weiqing [1 ]
Ding, Li [4 ,5 ,7 ]
Ning, Guang [1 ,2 ]
机构
[1] Shanghai Jiao Tong Univ, Shanghai Key Lab Endocrine Tumors, Shanghai Clin Ctr Endocrine & Metab Dis, Rui Jin Hosp,Sch Med, Shanghai, Peoples R China
[2] Chinese Acad Sci, Shanghai Inst Biol Sci, Lab Endocrinol & Metab, Shanghai, Peoples R China
[3] YuceBio, Shenzhen, Peoples R China
[4] Washington Univ, McDonnell Genome Inst, St Louis, MO 63130 USA
[5] Washington Univ, Dept Med, Div Oncol, St Louis, MO 63130 USA
[6] Chinese Acad Sci, Comp Network Informat Ctr, Dept High Performance Comp Technol & Applicat Dev, Beijing, Peoples R China
[7] Washington Univ, Siteman Canc Ctr, St Louis, MO 63130 USA
基金
中国国家自然科学基金;
关键词
GENES; PROGRESSION; LANDSCAPE; PATHWAY;
D O I
10.1038/s41422-018-0019-5
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
引用
收藏
页码:601 / 604
页数:4
相关论文
共 10 条
[1]   Whole exome sequencing of insulinoma reveals recurrent T372R mutations in YY1 [J].
Cao, Yanan ;
Gao, Zhibo ;
Li, Lin ;
Jiang, Xiuli ;
Shan, Aijing ;
Cai, Jie ;
Peng, Ying ;
Li, Yanli ;
Jiang, Xiaohua ;
Huang, Xuanlin ;
Wang, Jiaqian ;
Wei, Qing ;
Qin, Guijun ;
Zhao, Jiajun ;
Jin, Xiaolong ;
Liu, Li ;
Li, Yingrui ;
Wang, Weiqing ;
Wang, Jun ;
Ning, Guang .
NATURE COMMUNICATIONS, 2013, 4
[2]   ARRDC3 suppresses breast cancer progression by negatively regulating integrin β4 [J].
Draheim, K. M. ;
Chen, H-B ;
Tao, Q. ;
Moore, N. ;
Roche, M. ;
Lyle, S. .
ONCOGENE, 2010, 29 (36) :5032-5047
[3]   Frequent mutations in chromatin-remodelling genes in pulmonary carcinoids [J].
Fernandez-Cuesta, Lynnette ;
Peifer, Martin ;
Lu, Xin ;
Sun, Ruping ;
Ozretic, Luka ;
Seidel, Danila ;
Zander, Thomas ;
Leenders, Frauke ;
George, Julie ;
Mueller, Christian ;
Dahmen, Ilona ;
Pinther, Berit ;
Bosco, Graziella ;
Konrad, Kathryn ;
Altmueller, Janine ;
Nuernberg, Peter ;
Achter, Viktor ;
Lang, Ulrich ;
Schneider, Peter M. ;
Bogus, Magdalena ;
Soltermann, Alex ;
Brustugun, Odd Terje ;
Helland, Aslaug ;
Solberg, Steinar ;
Lund-Iversen, Marius ;
Ansen, Sascha ;
Stoelben, Erich ;
Wright, Gavin M. ;
Russell, Prudence ;
Wainer, Zoe ;
Solomon, Benjamin ;
Field, John K. ;
Hyde, Russell ;
Davies, Michael P. A. ;
Heukamp, Lukas C. ;
Petersen, Iver ;
Perner, Sven ;
Lovly, Christine M. ;
Cappuzzo, Federico ;
Travis, William D. ;
Wolf, Juergen ;
Vingron, Martin ;
Brambilla, Elisabeth ;
Haas, Stefan A. ;
Buettner, Reinhard ;
Thomas, Roman K. .
NATURE COMMUNICATIONS, 2014, 5 :3518
[4]   DAXX/ATRX, MEN1, and mTOR Pathway Genes Are Frequently Altered in Pancreatic Neuroendocrine Tumors [J].
Jiao, Yuchen ;
Shi, Chanjuan ;
Edil, Barish H. ;
de Wilde, Roeland F. ;
Klimstra, David S. ;
Maitra, Anirban ;
Schulick, Richard D. ;
Tang, Laura H. ;
Wolfgang, Christopher L. ;
Choti, Michael A. ;
Velculescu, Victor E. ;
Diaz, Luis A., Jr. ;
Vogelstein, Bert ;
Kinzler, Kenneth W. ;
Hruban, Ralph H. ;
Papadopoulos, Nickolas .
SCIENCE, 2011, 331 (6021) :1199-1203
[5]   Mutational landscape and significance across 12 major cancer types [J].
Kandoth, Cyriac ;
McLellan, Michael D. ;
Vandin, Fabio ;
Ye, Kai ;
Niu, Beifang ;
Lu, Charles ;
Xie, Mingchao ;
Zhang, Qunyuan ;
McMichael, Joshua F. ;
Wyczalkowski, Matthew A. ;
Leiserson, Mark D. M. ;
Miller, Christopher A. ;
Welch, John S. ;
Walter, Matthew J. ;
Wendl, Michael C. ;
Ley, Timothy J. ;
Wilson, Richard K. ;
Raphael, Benjamin J. ;
Ding, Li .
NATURE, 2013, 502 (7471) :333-+
[6]   Carcinoid and Neuroendocrine Tumors: Building on Success [J].
Kunz, Pamela L. .
JOURNAL OF CLINICAL ONCOLOGY, 2015, 33 (16) :1855-+
[7]   Ahnak functions as a tumor suppressor via modulation of TGFβ/Smad signaling pathway [J].
Lee, I. H. ;
Sohn, M. ;
Lim, H. J. ;
Yoon, S. ;
Oh, H. ;
Shin, S. ;
Shin, J. H. ;
Oh, S-H ;
Kim, J. ;
Lee, D. K. ;
Noh, D. Y. ;
Bae, D. S. ;
Seong, J. K. ;
Bae, Y. S. .
ONCOGENE, 2014, 33 (38) :4675-4684
[8]   The genetic landscape of high-risk neuroblastoma [J].
Pugh, Trevor J. ;
Morozova, Olena ;
Attiyeh, Edward F. ;
Asgharzadeh, Shahab ;
Wei, Jun S. ;
Auclair, Daniel ;
Carter, Scott L. ;
Cibulskis, Kristian ;
Hanna, Megan ;
Kiezun, Adam ;
Kim, Jaegil ;
Lawrence, Michael S. ;
Lichenstein, Lee ;
McKenna, Aaron ;
Pedamallu, Chandra Sekhar ;
Ramos, Alex H. ;
Shefler, Erica ;
Sivachenko, Andrey ;
Sougnez, Carrie ;
Stewart, Chip ;
Ally, Adrian ;
Birol, Inanc ;
Chiu, Readman ;
Corbett, Richard D. ;
Hirst, Martin ;
Jackman, Shaun D. ;
Kamoh, Baljit ;
Khodabakshi, Alireza Hadj ;
Krzywinski, Martin ;
Lo, Allan ;
Moore, Richard A. ;
Mungall, Karen L. ;
Qian, Jenny ;
Tam, Angela ;
Thiessen, Nina ;
Zhao, Yongjun ;
Cole, Kristina A. ;
Diamond, Maura ;
Diskin, Sharon J. ;
Mosse, Yael P. ;
Wood, Andrew C. ;
Ji, Lingyun ;
Sposto, Richard ;
Badgett, Thomas ;
London, Wendy B. ;
Moyer, Yvonne ;
Gastier-Foster, Julie M. ;
Smith, Malcolm A. ;
Auvil, Jaime M. Guidry ;
Gerhard, Daniela S. .
NATURE GENETICS, 2013, 45 (03) :279-284
[9]   Integrated genomic analyses identify ARID1A and ARID1B alterations in the childhood cancer neuroblastoma [J].
Sausen, Mark ;
Leary, Rebecca J. ;
Jones, Sian ;
Wu, Jian ;
Reynolds, C. Patrick ;
Liu, Xueyuan ;
Blackford, Amanda ;
Parmigiani, Giovanni ;
Diaz, Luis A., Jr. ;
Papadopoulos, Nickolas ;
Vogelstein, Bert ;
Kinzler, Kenneth W. ;
Velculescu, Victor E. ;
Hogarty, Michael D. .
NATURE GENETICS, 2013, 45 (01) :12-U31
[10]   Transposon mutagenesis identifies genes and evolutionary forces driving gastrointestinal tract tumor progression [J].
Takeda, Haruna ;
Wei, Zhubo ;
Koso, Hideto ;
Rust, Alistair G. ;
Yew, Christopher Chin Kuan ;
Mann, Michael B. ;
Ward, Jerrold M. ;
Adams, David J. ;
Copeland, Neal G. ;
Jenkins, Nancy A. .
NATURE GENETICS, 2015, 47 (02) :142-150