The complete plastid genome of the wild rice species Oryza brachyantha (Poaceae)

被引：8
|
作者：
Liu, Fengqi [1 ,2 ]
Tembrock, Luke R. [3 ]
Sun, Cheng [4 ]
Han, Guiqing [1 ,2 ]
Guo, Changhong [1 ]
Wu, Zhiqiang [3 ]
机构：
[1] Harbin Normal Univ, Coll Life Sci & Technol, Key Lab Mol Cytogenet & Genet Breeding Heilongjia, Harbin, Peoples R China
[2] Heilongjiang Acad Agr Sci, Inst Pratacultural Sci, Harbin, Peoples R China
[3] Colorado State Univ, Dept Biol, Ft Collins, CO 80523 USA
[4] Chinese Acad Agr Sci, Inst Apicultural Res, Key Lab Pollinating Insect Biol, Minist Agr, Beijing, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2016年 / 1卷 / 01期
关键词：
Next generation sequencing; Oryza brachyantha; plastid genome; rice; PHYLOGENY;
D O I：
10.1080/23802359.2016.1155093
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
The whole plastid genome of wild rice (Oryza brachyantha) is characterized in this study. The genome is 134 604 bp in length and is arranged in a typical circular structure, including a pair of inverted repeats (IRs) of 20 832 bp in size separated by a large single-copy region (LSC) of 80 411 bp in length and a small single-copy region (SSC) of 12 529 bp in length. The overall GC content of the genome is 38.98%. One hundred and ten unique genes were annotated from the chloroplast genome, including 76 protein-coding genes, 4 ribosomal RNA genes and 30 tRNA genes. A total of 20 of these genes are duplicated in the IR regions, 13 genes contain 1 intron and 2 genes (rps12 and ycf3) have 2 introns.
引用
收藏
页码：218 / 219
页数：2
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