A monophasic extraction strategy for the simultaneous lipidome analysis of polar and nonpolar retina lipids

被引:66
作者
Lydic, Todd A. [1 ]
Busik, Julia V. [2 ]
Reid, Gavin E. [1 ,3 ]
机构
[1] Michigan State Univ, Dept Chem, E Lansing, MI 48824 USA
[2] Michigan State Univ, Dept Physiol, E Lansing, MI 48824 USA
[3] Michigan State Univ, Dept Biochem & Mol Biol, E Lansing, MI 48824 USA
基金
美国国家卫生研究院;
关键词
lipidomics; lipid extraction; mass spectrometry; ganglioside; glycerolipid; sphingolipid; TANDEM MASS-SPECTROMETRY; COMPLEMENTARY PRECURSOR ION; SHOTGUN LIPIDOMICS; GANGLIOSIDE GM3; HIGH-THROUGHPUT; FATTY-ACIDS; CELLULAR LIPIDOMES; GD3; GANGLIOSIDE; GLOBAL ANALYSIS; HUMAN PLASMA;
D O I
10.1194/jlr.D050302
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Lipid extraction using a monophasic chloroform/methanol/water mixture, coupled with functional group selective derivatization and direct infusion nano-ESI-high-resolution/accurate MS, is shown to facilitate the simultaneous analysis of both highly polar and nonpolar lipids from a single retina lipid extract, including low abundance highly polar ganglioside lipids, nonpolar sphingolipids, and abundant glycerophospholipids. Quantitative comparison showed that the monophasic lipid extraction method yielded similar lipid distributions to those obtained from established "gold standard" biphasic lipid extraction methods known to enrich for either highly polar gangliosides or nonpolar lipids, respectively, with only modest relative ion suppression effects. This improved lipid extraction and analysis strategy therefore enables detailed lipidome analyses of lipid species across a broad range of polarities and abundances, from minimal amounts of biological samples and without need for multiple lipid class-specific extractions or chromatographic separation prior to analysis.
引用
收藏
页码:1797 / 1809
页数:13
相关论文
共 57 条
[51]   Involvement of gangliosides in the process of Cbp/PAG phosphorylation by Lyn in developing cerebellar growth cones [J].
Sekino-Suzuki, Naoko ;
Yuyama, Kohei ;
Miki, Toshiaki ;
Kaneda, Mizuho ;
Suzuki, Hidenori ;
Yamamoto, Naomasa ;
Yamamoto, Tadashi ;
Oneyama, Chitose ;
Okada, Masato ;
Kasahara, Kohji .
JOURNAL OF NEUROCHEMISTRY, 2013, 124 (04) :514-522
[52]   Comparative Plasma Lipidome between Human and Cynomolgus Monkey: Are Plasma Polar Lipids Good Biomarkers for Diabetic Monkeys? [J].
Shui, Guanghou ;
Stebbins, Jeffrey William ;
Lam, Buu Duyen ;
Cheong, Wei Fun ;
Lam, Sin Man ;
Gregoire, Francine ;
Kusonoki, Jun ;
Wenk, Markus R. .
PLOS ONE, 2011, 6 (05)
[53]   PROCEDURE FOR THE QUANTITATIVE ISOLATION OF BRAIN GANGLIOSIDES [J].
SVENNERHOLM, L ;
FREDMAN, P .
BIOCHIMICA ET BIOPHYSICA ACTA, 1980, 617 (01) :97-109
[54]   N-3 Polyunsaturated Fatty Acids Prevent Diabetic Retinopathy by Inhibition of Retinal Vascular Damage and Enhanced Endothelial Progenitor Cell Reparative Function [J].
Tikhonenko, Maria ;
Lydic, Todd A. ;
Opreanu, Madalina ;
Calzi, Sergio Li ;
Bozack, Svetlana ;
McSorley, Kelly M. ;
Sochacki, Andrew L. ;
Faber, Matthew S. ;
Hazra, Sugata ;
Duclos, Shane ;
Guberski, Dennis ;
Reid, Gavin E. ;
Grant, Maria B. ;
Busik, Julia V. .
PLOS ONE, 2013, 8 (01)
[55]   Remodeling of Retinal Fatty Acids in an Animal Model of Diabetes A Decrease in Long-Chain Polyunsaturated Fatty Acids Is Associated With a Decrease in Fatty Acid Elongases Elovl2 and Elovl4 [J].
Tikhonenko, Maria ;
Lydic, Todd A. ;
Wang, Yun ;
Chen, Weiqin ;
Opreanu, Madalina ;
Sochacki, Andrew ;
McSorley, Kelly M. ;
Renis, Rebecca L. ;
Kern, Timothy ;
Jump, Donald B. ;
Reid, Gavin E. ;
Busik, Julia V. .
DIABETES, 2010, 59 (01) :219-227
[56]   Use of high performance liquid chromatography-electrospray ionization-tandem mass spectrometry for the analysis of ceramide-1-phosphate levels [J].
Wijesinghe, Dayanjan S. ;
Allegood, Jeremy C. ;
Gentile, Luciana B. ;
Fox, Todd E. ;
Kester, Mark ;
Chalfant, Charles E. .
JOURNAL OF LIPID RESEARCH, 2010, 51 (03) :641-651
[57]   Profiling and sequence analysis of gangliosides in human astrocytoma by high-resolution mass spectrometry [J].
Zamfir, Alina D. ;
Fabris, Dragana ;
Capitan, Florina ;
Munteanu, Cristian ;
Vukelic, Zeljka ;
Flangea, Corina .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2013, 405 (23) :7321-7335