A monophasic extraction strategy for the simultaneous lipidome analysis of polar and nonpolar retina lipids

被引:66
作者
Lydic, Todd A. [1 ]
Busik, Julia V. [2 ]
Reid, Gavin E. [1 ,3 ]
机构
[1] Michigan State Univ, Dept Chem, E Lansing, MI 48824 USA
[2] Michigan State Univ, Dept Physiol, E Lansing, MI 48824 USA
[3] Michigan State Univ, Dept Biochem & Mol Biol, E Lansing, MI 48824 USA
基金
美国国家卫生研究院;
关键词
lipidomics; lipid extraction; mass spectrometry; ganglioside; glycerolipid; sphingolipid; TANDEM MASS-SPECTROMETRY; COMPLEMENTARY PRECURSOR ION; SHOTGUN LIPIDOMICS; GANGLIOSIDE GM3; HIGH-THROUGHPUT; FATTY-ACIDS; CELLULAR LIPIDOMES; GD3; GANGLIOSIDE; GLOBAL ANALYSIS; HUMAN PLASMA;
D O I
10.1194/jlr.D050302
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Lipid extraction using a monophasic chloroform/methanol/water mixture, coupled with functional group selective derivatization and direct infusion nano-ESI-high-resolution/accurate MS, is shown to facilitate the simultaneous analysis of both highly polar and nonpolar lipids from a single retina lipid extract, including low abundance highly polar ganglioside lipids, nonpolar sphingolipids, and abundant glycerophospholipids. Quantitative comparison showed that the monophasic lipid extraction method yielded similar lipid distributions to those obtained from established "gold standard" biphasic lipid extraction methods known to enrich for either highly polar gangliosides or nonpolar lipids, respectively, with only modest relative ion suppression effects. This improved lipid extraction and analysis strategy therefore enables detailed lipidome analyses of lipid species across a broad range of polarities and abundances, from minimal amounts of biological samples and without need for multiple lipid class-specific extractions or chromatographic separation prior to analysis.
引用
收藏
页码:1797 / 1809
页数:13
相关论文
共 57 条
[31]   Membrane ganglioside enrichment lowers the threshold for vascular endothelial cell angiogenic signaling [J].
Liu, Yihui ;
McCarthy, James ;
Ladisch, Stephan .
CANCER RESEARCH, 2006, 66 (21) :10408-10414
[32]   Analysis of Retina and Erythrocyte Glycerophospholipid Alterations in a Rat Model of Type 1 Diabetes [J].
Lydic, Todd A. ;
Renis, Rebecca ;
Busik, Julia V. ;
Reid, Gavin E. .
JALA, 2009, 14 (06) :383-399
[33]   Complementary precursor ion and neutral loss scan mode tandem mass spectrometry for the analysis of glycerophosphatidylethanolamine lipids from whole rat retina [J].
Lydic, Todd A. ;
Busik, Julia V. ;
Esselman, Walter J. ;
Reid, Gavin E. .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2009, 394 (01) :267-275
[34]   GD3 ganglioside and apoptosis [J].
Malisan, F ;
Testi, R .
BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR AND CELL BIOLOGY OF LIPIDS, 2002, 1585 (2-3) :179-187
[35]   Acetylation suppresses the proapoptotic activity of GD3 ganglioside [J].
Malisan, F ;
Franchi, L ;
Tomassini, B ;
Ventura, N ;
Condò, I ;
Rippo, MR ;
Rufini, A ;
Liberati, L ;
Nachtigall, C ;
Kniep, B ;
Testi, R .
JOURNAL OF EXPERIMENTAL MEDICINE, 2002, 196 (12) :1535-1541
[36]   Lipid extraction by methyl-tert-butyl ether for high-throughput lipidomics [J].
Matyash, Vitali ;
Liebisch, Gerhard ;
Kurzchalia, Teymuras V. ;
Shevchenko, Andrej ;
Schwudke, Dominik .
JOURNAL OF LIPID RESEARCH, 2008, 49 (05) :1137-1146
[37]   Sphingolipidomics: High-throughput, structure-specific, and quantitative analysis of sphingolipids by liquid chromatography tandem mass spectrometry [J].
Merrill, AH ;
Sullards, MC ;
Allegood, JC ;
Kelly, S ;
Wang, E .
METHODS, 2005, 36 (02) :207-224
[38]   Sphingolipid and Glycosphingolipid Metabolic Pathways in the Era of Sphingolipidomics [J].
Merrill, Alfred H., Jr. .
CHEMICAL REVIEWS, 2011, 111 (10) :6387-6422
[39]   Nano-electrospray ionization time-of-flight mass spectrometry of gangliosides from human brain tissue [J].
Metelmann, W ;
Vukelic, Z ;
Peter-Katalinic, J .
JOURNAL OF MASS SPECTROMETRY, 2001, 36 (01) :21-29
[40]   A targeted mass spectrometric analysis of phosphatidylinositol phosphate species [J].
Milne, SB ;
Ivanova, PT ;
DeCamp, D ;
Hsueh, RC ;
Brown, HA .
JOURNAL OF LIPID RESEARCH, 2005, 46 (08) :1796-1802