Coming of age: orphan genes in plants

被引：123

作者：

Arendsee, Zebulun W. ^{[1
]}

Li, Ling ^{[1
]}

Wurtele, Eve Syrkin ^{[1
]}

机构：

[1] Iowa State Univ, Dept Genet Dev & Cell Biol, Ames, IA 50011 USA

来源：

TRENDS IN PLANT SCIENCE | 2014年 / 19卷 / 11期

基金：

美国国家科学基金会;

关键词：

orphan; phylostratigraphy; Arabidopsis; QQS; cysteine-rich secretory Proteins; LINEAGE-SPECIFIC GENES; JELLYFISH AURELIA-AURITA; DE-NOVO EVOLUTION; ARABIDOPSIS-THALIANA; ANTIMICROBIAL PEPTIDE; DROSOPHILA-MELANOGASTER; TRANSCRIPTION FACTORS; EXPRESSION ANALYSIS; FAMILY EVOLUTION; RICE GENE;

D O I：

10.1016/j.tplants.2014.07.003

中图分类号：

Q94 [植物学];

学科分类号：

071001 ;

摘要：

Sizable minorities of protein-coding genes from every sequenced eukaryotic and prokaryotic genome are unique to the species. These so-called 'orphan genes' may evolve de novo from non-coding sequence or be derived from older coding material. They are often associated with environmental stress responses and species-specific traits or regulatory patterns. However, difficulties in studying genes where comparative analysis is impossible, and a bias towards broadly conserved genes, have resulted in underappreciation of their importance. We review here the identification, possible origins, evolutionary trends, and functions of orphans with an emphasis on their role in plant biology. We exemplify several evolutionary trends with an analysis of Arabidopsis thaliana and present QQS as a model orphan gene.

引用

页码：698 / 708

页数：11

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