A simple and efficient dispersion correction to the Hartree-Fock theory (3): A comprehensive performance comparison of HF-Dtq with MP2 and DFT-Ds

被引:3
作者
Yoshida, Tatsusada [1 ]
Hayashi, Takahisa [1 ]
Mashima, Akira [1 ]
Sasahara, Katsunori [1 ]
Chuman, Hiroshi [1 ]
机构
[1] Univ Tokushima, Inst Biomed Sci, Grad Sch, Tokushima 7708505, Japan
关键词
Basis set superposition error; Complete basis set; Coupled cluster theory; Density functional theory; Dispersion energy correction; Geometrical correction for BSSE; Hartree-Fock theory; Moller-Plesset perturbation theory; Ligand-protein interaction energy; INITIO MO CALCULATIONS; SIALIC-ACID ANALOGS; INTERACTION ENERGIES; BINDING-AFFINITY; GEOMETRICAL CORRECTION; COMPLEX STRUCTURES; CCSD(T); ACCURATE; ONIOM; CHEMISTRY;
D O I
10.1016/j.bmcl.2015.11.061
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
Accurate prediction of the intermolecular interaction energy (Delta E-bind) has been a challenging and serious problem. Current in silico drug screening demands efficient and accurate evaluation of Delta E-bind for ligands and their target proteins. It is desirable that Delta E-bind including the dispersion interaction energy (E-disp) is calculated using a post-Hartree-Fock (HF) theory, such as the high-order coupled-cluster one, with a larger basis set. However, it remains computationally too expensive to apply such a one to large molecular systems. As another problem, it is necessary to consider the contribution of the basis set superposition error (BSSE) in calculation of Delta E-bind. In Bioorg. Med. Chem. Lett. 2014 and 2015, we proposed simple and efficient corrections of dispersion and BSSE for the HF theory, which is not able to express the dispersion interaction energy correctly. The current Letter, as the final one in the series, aims to verify the HF theory enhanced by the dispersion correction (HF-Dtq) in the light of reproducibility of 'accurate' intermolecular ligand-protein interaction energy values, with comprehensive comparison with the MP2 and recently proposed various DFT-D theories. Taking Delta E-bind calculated with the coupled-cluster theory coupled with a complete basis set as a reference, Delta E-bind of over a hundred small sized noncovalent complexes as well as real ligand-protein complexes models was systematically examined in terms of accuracy and computational cost. The comprehensive comparison in the current work showed that HF-Dtq is a practical and reliable approach for in silico drug screening and quantitative structure-activity relationships. (C) 2015 Elsevier Ltd. All rights reserved.
引用
收藏
页码:589 / 593
页数:5
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