Genomic sequence of an isolate of Newcastle disease virus isolated from an outbreak in geese:: a novel six nucleotide insertion in the non-coding region of the nucleoprotein gene

被引：73

作者：

Huang, Y ^{[1
]}

Wan, HQ ^{[1
]}

Liu, HQ ^{[1
]}

Wu, YT ^{[1
]}

Liu, XF ^{[1
]}

机构：

[1] Yangzhou Univ, Sch Vet Med, Anim Infect Dis Lab, Yangzhou 225009, Jiangsu, Peoples R China

来源：

ARCHIVES OF VIROLOGY | 2004年 / 149卷 / 07期

关键词：

D O I：

10.1007/s00705-004-0297-8

中图分类号：

Q93 [微生物学];

学科分类号：

071005 ; 100705 ;

摘要：

We have completely sequenced the genome of an isolate of Newcastle disease virus (NDV) obtained following an outbreak in geese. The genomic sequence consists of 15192 nt, which is six nt longer than the published full length genome of the NDV strains La Sota, B1, Clone-30, Beaudette C and HB V4. The six nt insertion was located in the non-coding region of the nucleoprotein (NP) gene between nt 1646 and nt 1647 of the NDV genome (numbered according to the genomic sequence of the La Sota strain). An additional 22 NDV strains were searched for the existence of this six nt insertion. NDVs in genotypes VI, VII, VIII and IX had this insertion while NDV's in genotypes I, II, III, IV, and V did not. The significance of this insertion in NDV evolution is discussed.

引用

页码：1445 / 1457

页数：13

共 32 条

[1]

Alexander D.J., 1997, Diseases of poultry, V10th, P541

[2] Identification and grouping of Newcastle disease virus strains by restriction site analysis of a region from the F gene [J].

BallagiPordany, A ;

Wehmann, E ;

Herczeg, J ;

Belak, S ;

Lomniczi, B .

ARCHIVES OF VIROLOGY, 1996, 141 (02) :243-261

[3] THE RULE OF 6, A BASIC FEATURE FOR EFFICIENT REPLICATION OF SENDAI VIRUS DEFECTIVE INTERFERING RNA [J].

CALAIN, P ;

ROUX, L .

JOURNAL OF VIROLOGY, 1993, 67 (08) :4822-4830

[4] Complete nucleotide sequence of avian paramyxovirus type 6 isolated from ducks [J].

Chang, PC ;

Hsieh, ML ;

Shien, JH ;

Graham, DA ;

Lee, MS ;

Shieh, HK .

JOURNAL OF GENERAL VIROLOGY, 2001, 82 :2157-2168

[5] Complete nucleotide sequence of Newcastle disease virus:: evidence for the existence of a new genus within the subfamily Paramyxovirinae [J].

de Leeuw, O ;

Peeters, B .

JOURNAL OF GENERAL VIROLOGY, 1999, 80 :131-136

[6] Negative-strand RNA viruses:: applications to biotechnology [J].

García-Sastre, A .

TRENDS IN BIOTECHNOLOGY, 1998, 16 (05) :230-235

[7] A NOVEL PLAQUE-ASSAY SYSTEM FOR PARAMYXOVIRUSES [J].

HARPER, DR .

JOURNAL OF VIROLOGICAL METHODS, 1989, 25 (03) :347-350

[8] High-level expression of a foreign gene from the most 3′-proximal locus of a recombinant Newcastle disease virus [J].

Huang, ZH ;

Krishnamurthy, S ;

Panda, A ;

Samal, SK .

JOURNAL OF GENERAL VIROLOGY, 2001, 82 :1729-1736

[9] Paramyxovirus RNA synthesis and the requirement for hexamer genome length: the rule of six revisited [J].

Kolakofsky, D ;

Pelet, T ;

Garcin, D ;

Hausmann, S ;

Curran, J ;

Roux, L .

JOURNAL OF VIROLOGY, 1998, 72 (02) :891-899

[10] Nucleotide sequences of the trailer, nucleocapsid protein gene and intergenic regions of Newcastle disease virus strain Beaudette C and completion of the entire genome sequence [J].

Krishnamurthy, S ;

Samal, SK .

JOURNAL OF GENERAL VIROLOGY, 1998, 79 :2419-2424

← 1 2 3 4 →