Highlight report: quality control for genome-wide expression data: how to identify sample mix-up

被引：0
作者：
Grinberg, Marianna [1 ]
机构：
[1] Tech Univ Dortmund, Fak Stat, D-44221 Dortmund, Germany
来源：
ARCHIVES OF TOXICOLOGY | 2015年 / 89卷 / 12期
关键词：
GENE-EXPRESSION; CELL-MIGRATION; TEST SYSTEMS; DIFFERENTIATION; PROGNOSIS; RESPONSES; PROTEIN; DESIGN; CANCER; LIVER;
D O I：
10.1007/s00204-015-1644-0
中图分类号：
R99 [毒物学（毒理学）];
学科分类号：
100405 ;
摘要：
引用
收藏
页码：2459 / 2461
页数：3
相关论文
共 28 条
  • [1] From transient transcriptome responses to disturbed neurodevelopment: role of histone acetylation and methylation as epigenetic switch between reversible and irreversible drug effects
    Balmer, Nina V.
    Klima, Stefanie
    Rempel, Eugen
    Ivanova, Violeta N.
    Kolde, Raivo
    Weng, Matthias K.
    Meganathan, Kesavan
    Henry, Margit
    Sachinidis, Agapios
    Berthold, Michael R.
    Hengstler, Jan G.
    Rahnenfuhrer, Jorg
    Waldmann, Tanja
    Leist, Marcel
    [J]. ARCHIVES OF TOXICOLOGY, 2014, 88 (07) : 1451 - 1468
  • [2] Loss of circadian clock gene expression is associated with tumor progression in breast cancer
    Cadenas, Cristina
    van de Sandt, Leonie
    Edlund, Karolina
    Lohr, Miriam
    Hellwig, Birte
    Marchan, Rosemarie
    Schmidt, Marcus
    Rahnenfuehrer, Joerg
    Oster, Henrik
    Hengstler, Jan G.
    [J]. CELL CYCLE, 2014, 13 (20) : 3282 - 3291
  • [3] Role of thioredoxin reductase 1 and thioredoxin interacting protein in prognosis of breast cancer
    Cadenas, Cristina
    Franckenstein, Dennis
    Schmidt, Marcus
    Gehrmann, Mathias
    Hermes, Matthias
    Geppert, Bettina
    Schormann, Wiebke
    Maccoux, Lindsey J.
    Schug, Markus
    Schumann, Anika
    Wilhelm, Christian
    Freis, Evgenia
    Ickstadt, Katja
    Rahnenfuehrer, Joerg
    Baumbach, Joerg I.
    Sickmann, Albert
    Hengstler, Jan G.
    [J]. BREAST CANCER RESEARCH, 2010, 12 (03)
  • [4] The transcription factor CHOP, a central component of the transcriptional regulatory network induced upon CCl4 intoxication in mouse liver, is not a critical mediator of hepatotoxicity
    Campos, Gisela
    Schmidt-Heck, Wolfgang
    Ghallab, Ahmed
    Rochlitz, Katharina
    Puetter, Larissa
    Medinas, Danilo B.
    Hetz, Claudio
    Widera, Agata
    Cadenas, Cristina
    Begher-Tibbe, Brigitte
    Reif, Raymond
    Guenther, Georgia
    Sachinidis, Agapios
    Hengstler, Jan G.
    Godoy, Patricio
    [J]. ARCHIVES OF TOXICOLOGY, 2014, 88 (06) : 1267 - 1280
  • [5] Comparison of genotoxicant-modified transcriptomic responses in conventional and epigenetically stabilized primary rat hepatocytes with in vivo rat liver data
    Doktorova, Tatyana Y.
    Ellinger-Ziegelbauer, Heidrun
    Vinken, Mathieu
    Vanhaecke, Tamara
    van Delft, Joost
    Kleinjans, Jos
    Ahr, Hans-Juergen
    Rogiers, Vera
    [J]. ARCHIVES OF TOXICOLOGY, 2012, 86 (11) : 1703 - 1715
  • [6] AhR-mediated changes in global gene expression in rat liver progenitor cells
    Faust, Dagmar
    Vondracek, Jan
    Krcmar, Pavel
    Smerdova, Lenka
    Prochazkova, Jirina
    Hruba, Eva
    Hulinkova, Petra
    Kaina, Bernd
    Dietrich, Cornelia
    Machala, Miroslav
    [J]. ARCHIVES OF TOXICOLOGY, 2013, 87 (04) : 681 - 698
  • [7] Gene networks and transcription factor motifs defining the differentiation of stem cells into hepatocyte-like cells
    Godoy, Patricio
    Schmidt-Heck, Wolfgang
    Natarajan, Karthick
    Lucendo-Villarin, Baltasar
    Szkolnicka, Dagmara
    Asplund, Annika
    Bjorquist, Petter
    Widera, Agata
    Stober, Regina
    Campos, Gisela
    Hammad, Seddik
    Sachinidis, Agapios
    Chaudhari, Umesh
    Damm, Georg
    Weiss, Thomas S.
    Nuessler, Andreas
    Synnergren, Jane
    Edlund, Karolina
    Kueppers-Munther, Barbara
    Hay, David C.
    Hengstler, Jan G.
    [J]. JOURNAL OF HEPATOLOGY, 2015, 63 (04) : 934 - 942
  • [8] Interferon-inducible guanylate binding protein (GBP2) is associated with better prognosis in breast cancer and indicates an efficient T cell response
    Godoy, Patricio
    Cadenas, Cristina
    Hellwig, Birte
    Marchan, Rosemarie
    Stewart, Joanna
    Reif, Raymond
    Lohr, Miriam
    Gehrmann, Matthias
    Rahnenfuehrer, Joerg
    Schmidt, Markus
    Hengstler, Jan G.
    [J]. BREAST CANCER, 2014, 21 (04) : 491 - 499
  • [9] Toxicogenomics directory of chemically exposed human hepatocytes
    Grinberg, Marianna
    Stoeber, Regina M.
    Edlund, Karolina
    Rempel, Eugen
    Godoy, Patricio
    Reif, Raymond
    Widera, Agata
    Madjar, Katrin
    Schmidt-Heck, Wolfgang
    Marchan, Rosemarie
    Sachinidis, Agapios
    Spitkovsky, Dimitry
    Hescheler, Jurgen
    Carmo, Helena
    Arbo, Marcelo D.
    van de Water, Bob
    Wink, Steven
    Vinken, Mathieu
    Rogiers, Vera
    Escher, Sylvia
    Hardy, Barry
    Mitic, Dragana
    Myatt, Glenn
    Waldmann, Tanja
    Mardinoglu, Adil
    Damm, Georg
    Seehofer, Daniel
    Nuessler, Andreas
    Weiss, Thomas S.
    Oberemm, Axel
    Lampen, Alfons
    Schaap, Mirjam M.
    Luijten, Mirjam
    van Steeg, Harry
    Thasler, Wolfgang E.
    Kleinjans, Jos C. S.
    Stierum, Rob H.
    Leist, Marcel
    Rahnenfuehrer, Joerg
    Hengstler, Jan G.
    [J]. ARCHIVES OF TOXICOLOGY, 2014, 88 (12) : 2261 - 2287
  • [10] Hammad S, 2014, EXCLI J, V13, P1275
123