PhagesDB: the actinobacteriophage database

被引:303
作者
Russell, Daniel A. [1 ]
Hatfull, Graham F. [1 ]
机构
[1] Univ Pittsburgh, Dept Biol Sci, Pittsburgh, PA 15260 USA
基金
美国国家卫生研究院;
关键词
GENOMICS;
D O I
10.1093/bioinformatics/btw711
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
The Actinobacteriophage Database (PhagesDB) is a comprehensive, interactive, database-backed website that collects and shares information related to the discovery, characterization and genomics of viruses that infect Actinobacterial hosts. To date, more than 8000 bacteriophages-including over 1600 with sequenced genomes-have been entered into the database. PhagesDB plays a crucial role in organizing the discoveries of phage biologists around the world-including students in the SEA-PHAGES program-and has been cited in over 50 peer-reviewed articles.
引用
收藏
页码:784 / 786
页数:3
相关论文
共 7 条
  • [1] Phamerator: a bioinformatic tool for comparative bacteriophage genomics
    Cresawn, Steven G.
    Bogel, Matt
    Day, Nathan
    Jacobs-Sera, Deborah
    Hendrix, Roger W.
    Hatfull, Graham F.
    [J]. BMC BIOINFORMATICS, 2011, 12
  • [2] Teaching scientific inquiry
    Hanauer, David I.
    Jacobs-Sera, Deborah
    Pedulla, Marisa L.
    Cresawn, Steven G.
    Hendrix, Roger W.
    Hatfull, Graham F.
    [J]. SCIENCE, 2006, 314 (5807) : 1880 - 1881
  • [3] DNA-SEQUENCE, STRUCTURE AND GENE-EXPRESSION OF MYCOBACTERIOPHAGE-L5 - A PHAGE SYSTEM FOR MYCOBACTERIAL GENETICS
    HATFULL, GF
    SARKIS, GJ
    [J]. MOLECULAR MICROBIOLOGY, 1993, 7 (03) : 395 - 405
  • [4] Exploring the mycobacteriophage metaproteome: Phage genomics as an educational platform
    Hatfull, Graham F.
    Pedulla, Marisa L.
    Jacobs-Sera, Deborah
    Cichon, Pauline M.
    Foley, Amy
    Ford, Michael E.
    Gonda, Rebecca M.
    Houtz, Jennifer M.
    Hryckowian, Andrew J.
    Kelchner, Vanessa A.
    Namburi, Swathi
    Pajcini, Kostandin V.
    Popovich, Mark G.
    Schleicher, Donald T.
    Simanek, Brian Z.
    Smith, Alexis L.
    Zdanowicz, Gina M.
    Kumar, Vanaja
    Peebles, Craig L.
    Jacobs, William R., Jr.
    Lawrence, Jeffrey G.
    Hendrix, Roger W.
    [J]. PLOS GENETICS, 2006, 2 (06): : 835 - 847
  • [5] Innovations in Undergraduate Science Education: Going Viral
    Hatfull, Graham F.
    [J]. JOURNAL OF VIROLOGY, 2015, 89 (16) : 8111 - 8113
  • [6] A Broadly Implementable Research Course in Phage Discovery and Genomics for First-Year Undergraduate Students
    Jordan, Tuajuanda C.
    Burnett, Sandra H.
    Carson, Susan
    Caruso, Steven M.
    Clase, Kari
    DeJong, Randall J.
    Dennehy, John J.
    Denver, Dee R.
    Dunbar, David
    Elgin, Sarah C. R.
    Findley, Ann M.
    Gissendanner, Chris R.
    Golebiewska, Urszula P.
    Guild, Nancy
    Hartzog, Grant A.
    Grillo, Wendy H.
    Hollowell, Gail P.
    Hughes, Lee E.
    Johnson, Allison
    King, Rodney A.
    Lewis, Lynn O.
    Li, Wei
    Rosenzweig, Frank
    Rubin, Michael R.
    Saha, Margaret S.
    Sandoz, James
    Shaffer, Christopher D.
    Taylor, Barbara
    Temple, Louise
    Vazquez, Edwin
    Ware, Vassie C.
    Barker, Lucia P.
    Bradley, Kevin W.
    Jacobs-Sera, Deborah
    Pope, Welkin H.
    Russell, Daniel A.
    Cresawn, Steven G.
    Lopatto, David
    Bailey, Cheryl P.
    Hatfull, Graham F.
    [J]. MBIO, 2014, 5 (01):
  • [7] Origins of highly mosaic mycobacteriophage genomes
    Pedulla, ML
    Ford, ME
    Houtz, JM
    Karthikeyan, T
    Wadsworth, C
    Lewis, JA
    Jacobs-Sera, D
    Falbo, J
    Gross, J
    Pannunzio, NR
    Brucker, W
    Kumar, V
    Kandasamy, J
    Keenan, L
    Bardarov, S
    Kriakov, J
    Lawrence, JG
    Jacobs, WR
    Hendrix, RW
    Hatfull, GF
    [J]. CELL, 2003, 113 (02) : 171 - 182