GENETIC DIVERSITY OF WILD AND CULTIVATED MANGO GENOTYPES OF PAKISTAN USING SSR MARKERS

被引:3
作者
Riaz, Rehan [1 ]
Khan, Ahmad Sattar [1 ]
Ziaf, Khurram [1 ]
Cheema, Hafiza Masooma Naseer [2 ]
机构
[1] Univ Agr Faisalabad, Inst Hort Sci, Faisalabad 38040, Pakistan
[2] Univ Agr Faisalabad, Dept Plant Breeding & Genet, Plant Genet Resources Lab, Faisalabad 38040, Pakistan
来源
PAKISTAN JOURNAL OF AGRICULTURAL SCIENCES | 2018年 / 55卷 / 01期
关键词
Tropical fruits; mango cultivars; population structure; genetic resources; germplasm; genetic markers; MANGIFERA-INDICA L; MICROSATELLITE MARKERS; POPULATION-STRUCTURE; RAPD MARKERS; MOLECULAR CHARACTERIZATION; GERMPLASM; QUALITY; SOFTWARE;
D O I
10.21162/PAKJAS/18.6360
中图分类号
S [农业科学];
学科分类号
09 ;
摘要
Pakistan is blessed with a wide range of indigenous mango germplasm. Wild mango genotypes, growing at Azad Jammu and Kashmir (AJK) and its vicinity are valuable resource for unique genetic diversity. The DNA fingerprints of this available germplasm have never been worked out. Hence, the aim of this study was to develop DNA profiles of 31 wild and 13 cultivated genotypes of the country to determine the population structure. Number of alleles per locus of the 51 Simple sequence repeat (S SR) markers ranged from 3 to 9 and a total of 296 alleles with an average of 5.80 alleles per locus. The average polymorphism information content value was 0.764. The expected and observed heterozygosity values were 0.805 and 0.720, respectively, which exhibited high level of genetic diversity in the wild and cultivated mango germplasm. The Bayesian cluster, principal coordinate and hierarchical clustering analyses divided the collected genotypes into three groups i.e. A, B and C. Members of group A and B consisted of wild genotypes entirely, while all commercial genotypes were clustered in group C. The obtained results highlighted genetic diversity encompassed by wild mango genotypes of AJK which can be considered as distinct genotypes for further evaluations in the framework of breeding programs and new cultivar identification in mango.
引用
收藏
页码:83 / 93
页数:11
相关论文
共 42 条
[21]  
Perrier X., 2006, GENETIC DIVERSITY CU, P43
[22]  
Pritchard JK, 2000, GENETICS, V155, P945
[23]  
Rahman M. L., 2007, Plant Tissue Culture & Biotechnology, V17, P71
[24]   Assessment of genetic diversity among mango (Mangifera indica L.) genotypes using RAPD markers [J].
Rajwana, Ishtiacl Ahmad ;
Tabbasam, Nabila ;
Malik, Aman Ullah ;
Malik, Saeed Ahmad ;
Mehboob-ur-Rahman ;
Zafar, Yusuf .
SCIENTIA HORTICULTURAE, 2008, 117 (03) :297-301
[25]  
Rajwana IA, 2011, INT J AGRIC BIOL, V13, P151
[26]  
Rajwana IA, 2010, PAK J BOT, V42, P2503
[27]   Genetic diversity and population structure analysis of mango (Mangifera indica) cultivars assessed by microsatellite markers [J].
Ravishankar, Kundapura V. ;
Bommisetty, Padmakar ;
Bajpai, Anju ;
Srivastava, Navin ;
Mani, Bellam H. ;
Vasugi, Chinnaiyan ;
Rajan, Shailendra ;
Dinesh, Makki R. .
TREES-STRUCTURE AND FUNCTION, 2015, 29 (03) :775-783
[28]   DEVELOPMENT OF NEW MICROSATELLITE MARKERS FROM MANGO (MANGIFERA INDICA) AND CROSS-SPECIES AMPLIFICATION [J].
Ravishankar, Kundapura Venkataramana ;
Mani, Bellam Hanumantha-Reddy ;
Anand, Lalitha ;
Dinesh, Makki Ramachandra .
AMERICAN JOURNAL OF BOTANY, 2011, 98 (04) :E96-E99
[29]   Assessment of genetic relatedness among mango cultivars of India using RAPD markers [J].
Ravishankar, KV ;
Anand, L ;
Dinesh, MR .
JOURNAL OF HORTICULTURAL SCIENCE & BIOTECHNOLOGY, 2000, 75 (02) :198-201
[30]   Evaluation of genetic diversity among commercial cultivars, hybrids and local mango (Mangifera indica L.) genotypes of India using cumulative RAPD and ISSR markers [J].
Samal, K. C. ;
Jena, R. C. ;
Swain, S. S. ;
Das, B. K. ;
Chand, P. K. .
EUPHYTICA, 2012, 185 (02) :195-213