A patient-driven clinicogenomic partnership for metastatic prostate cancer

被引:1
作者
Crowdis, Jett [1 ,2 ]
Balch, Sara [1 ,2 ]
Sterlin, Lauren [2 ,3 ]
Thomas, Beena S. [2 ,3 ]
Camp, Sabrina Y. [1 ,2 ]
Dunphy, Michael [2 ,3 ]
Anastasio, Elana [2 ,3 ]
Shah, Shahrayz [2 ,3 ]
Damon, Alyssa L. [2 ,3 ]
Ramos, Rafael [1 ,2 ,3 ]
Sosa, Delia M. [2 ,3 ]
Small, Ilan K. [2 ,3 ]
Tomson, Brett N. [2 ,3 ]
Nguyen, Colleen M. [2 ,3 ]
Mcgillicuddy, Mary [2 ,3 ]
Chastain, Parker S. [2 ,3 ]
He, Meng Xiao [1 ,2 ,4 ]
Cheung, Alexander T. M. [2 ,5 ]
Wankowicz, Stephanie [6 ,7 ]
Tewari, Alok K. [1 ]
Kim, Dewey [1 ,2 ]
Aldubayan, Saud H. [1 ,2 ,8 ]
Dowdye, Ayanah [2 ,3 ]
Zola, Benjamin [2 ,3 ]
Nowak, Joel [9 ]
Manarite, Jan [9 ]
Gunn, Idola Henry [10 ]
Olson, Bryce [11 ]
Lander, Eric S. [2 ,12 ,13 ]
Painter, Corrie A. [2 ,3 ]
Wagle, Nikhil [1 ,2 ,3 ]
Van Allen, Eliezer M. [1 ,2 ,14 ]
机构
[1] Dana Farber Canc Inst, Dept Med Oncol, Boston, MA 02115 USA
[2] Broad Inst Harvard & MIT, Cambridge, MA 02142 USA
[3] Count Me In, Cambridge, MA 02142 USA
[4] Harvard Grad Program Biophys, Boston, MA 02115 USA
[5] NYU, Grossman Sch Med, New York, NY 10016 USA
[6] Univ Calif San Francisco, Biophys Grad Program, San Francisco, CA 94143 USA
[7] Univ Calif San Francisco, Dept Bioengn & Therapeut Sci, San Francisco, CA 94143 USA
[8] King Saud Bin Abdulaziz Univ Hlth Sci, Coll Med, Riyadh, Saudi Arabia
[9] Canc ABCs, Brooklyn, NY 11201 USA
[10] MomVetWifeWidow Org, Santa Clara, CA USA
[11] SequenceMe, Intel Corp, Global Strategist Hlth & Life Sci, Santa Clara, CA 95054 USA
[12] MIT, Dept Biol, Cambridge, MA 02142 USA
[13] Harvard Med Sch, Dept Syst Biol, Boston, MA 02115 USA
[14] Dana Farber Canc Inst, Ctr Canc Genom, Boston, MA 02115 USA
来源
CELL GENOMICS | 2022年 / 2卷 / 09期
基金
美国国家科学基金会; 美国国家卫生研究院;
关键词
CODING VARIANTS; ASSOCIATION; EXOME; RARE; LINKAGE; TRAITS; PCSK9;
D O I
10.1016/j.xgen.2022.100169
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Molecular profiling studies have enabled discoveries for metastatic prostate cancer (MPC) but have predom-inantly occurred in academic medical institutions and involved non-representative patient populations. We established the Metastatic Prostate Cancer Project (MPCproject, mpcproject.org), a patient-partnered initia-tive to involve patients with MPC living anywhere in the US and Canada in molecular research. Here, we pre-sent results from our partnership with the first 706 MPCproject participants. While 41% of patient partners live in rural, physician-shortage, or medically underserved areas, the MPCproject has not yet achieved racial diversity, a disparity that demands new initiatives detailed herein. Among molecular data from 333 patient partners (572 samples), exome sequencing of 63 tumor and 19 cell-free DNA (cfDNA) samples recapitulated known findings in MPC, while inexpensive ultra-low-coverage sequencing of 318 cfDNA samples revealed clinically relevant AR amplifications. This study illustrates the power of a growing, longitudinal partnership with patients to generate a more representative understanding of MPC.
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页数:18
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