A universal pre-analytic solution for concurrent stabilization of salivary proteins, RNA and DNA at ambient temperature

被引:29
作者
Jiang, Jiang
Park, Noh Jin
Hu, Shen
Wong, David T. [1 ,2 ,3 ,4 ]
机构
[1] Univ Calif Los Angeles, Sch Dent, Dent Res Inst, Los Angeles, CA 90095 USA
[2] Univ Calif Los Angeles, Jonsson Comprehens Canc Ctr, Los Angeles, CA 90095 USA
[3] Univ Calif Los Angeles, Div Otolaryngol Head & Neck Surg, Los Angeles, CA 90095 USA
[4] Univ Calif Los Angeles, Henry Samueli Sch Engn & Appl Sci, Los Angeles, CA 90095 USA
关键词
Saliva diagnostics; Saliva stabilizer; Salivary biomarkers; Proteins; DNA; RNA; PROTEOME ANALYSIS; MASS-SPECTROMETRY; ORAL-CANCER; TRANSCRIPTOME; BIOMARKERS; DISCOVERY;
D O I
10.1016/j.archoralbio.2008.10.004
中图分类号
R78 [口腔科学];
学科分类号
1003 ;
摘要
Objective: Saliva is a biofluid that can be obtained from individuals without supervision by health care providers. To maximize this clinical advantage, it is highly desirable to have a global salivary analyte stabilizer for proteins, RNA and DNA at ambient temperature. Design: Whole saliva, saliva supernatant and saliva filtrate (5.0 mu m) were treated with RPS at room temperature (RT) for up to 6 days and then subjected to SDS-PAGE. Immunoblotting of beta-actin and cystatin C were used to evaluate protein stability. For salivary DNA/RNA, whole saliva was incubated with RPS at RT for up to 10 weeks. After extracting total DNA/RNA in samples at week 0, 2,6 and 10, DNA stability was assayed by chromosome 18 DNA qPCR and RNA stability by beta-actin mRNA RT-qPCR. Results: beta-actin completely degraded in all types of saliva samples after 6-day incubation at RT. However, 24.0%, 91.4% and 89.3% of beta-actin remained intact with RPS for whole saliva, saliva supernatant and filtrate, respectively. Similarly, 70.3% of cystatin C in supernatant remained intact in the presence of RPS. For salivary DNA/RNA, the cycle threshold (Ct) values showed no significant change for chromosome 18 DNA and beta-actin mRNA in RPS-incubated saliva during the 10-week time course while significant increase in Ct values were observed in controls without RPS for both beta-actin mRNA and DNA. Conclusions: RPS provided effective concurrent stabilization to salivary DNA/RNA in whole saliva for up to 10 weeks and proteins in saliva filtrate for 6 days at RT. We also achieved separation of saliva supernatant from cellular elements by a simple filtration step (bypassing the need for centrifugation). (c) 2008 Elsevier Ltd. All rights reserved.
引用
收藏
页码:268 / 273
页数:6
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