FioreDB: a database of phenotypic information induced by the chimeric repressor silencing technology (CRES-T) in Arabidopsis and floricultural plants

被引:21
作者
Mitsuda, Nobutaka [1 ,7 ]
Umemura, Yoshimi [1 ,7 ]
Ikeda, Miho [1 ]
Shikata, Masahito [1 ]
Koyama, Tomotsugu [1 ]
Matsui, Kyoko [1 ]
Narumi, Takako [2 ]
Aida, Ryutaro [2 ]
Sasaki, Katsutomo [2 ]
Hiyama, Tomomi [3 ]
Higuchi, Youhei [3 ]
Ono, Michiyuki [3 ]
Isuzugawa, Kanji [4 ]
Saitoh, Kumi [4 ]
Endo, Reiko [4 ]
Ikeda, Kazuo [4 ]
Nakatsuka, Takashi [5 ]
Nishihara, Masahiro [5 ]
Yamamura, Saburo [5 ]
Yamamura, Tomomichi [6 ]
Terakawa, Teruhiko [6 ]
Ohtsubo, Norihiro [2 ]
Ohme-Takagi, Masaru [1 ,7 ]
机构
[1] Natl Inst Adv Ind Sci & Technol, Res Inst Genome Based Biofactory, Tsukuba, Ibaraki 3058562, Japan
[2] Natl Agr & Food Res Org, Natl Inst Floricultural Sci, Tsukuba, Ibaraki 3058519, Japan
[3] Univ Tsukuba, Ctr Gene Res, Grad Sch Life & Environm Sci, Tsukuba, Ibaraki 3058572, Japan
[4] Yamagata Gen Agr Res Ctr, Dept Agroprod Sci, Sagae, Yamagata 9910043, Japan
[5] Iwate Biotechnol Res Ctr, Kitakami, Iwate 0240003, Japan
[6] Hokko Chem Ind Co, Cent Res Labs, Kanagawa 2430023, Japan
[7] Japan Sci & Technol Agcy, CREST, Kawaguchi, Saitama 3320012, Japan
关键词
Arabidopsis; chimeric repressor; CRES-T; database; floricultural plant;
D O I
10.5511/plantbiotechnology.25.37
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Manipulation of horticultural plants' traits using genetic engineering has been a challenge because of gene redundancy and limited information concerning genome or other factors necessary for successful engineering. Recently we have developed a powerful tool with potential to overcome these difficulties, a novel gene silencing technology targeting transcription factor, which is designated Chimeric REpressor gene-Silencing Technology (CRES-T). Using this system, we are now analyzing biological functions of transcription factors in Arabidopsis and trying to manipulate morphological traits of various floricultural plants. To provide these information for genetic engineering of horticultural plants, we have developed the 'FioreDB' database in a web-based interface (http://www.cres-t.org/fiore/public_db/), which stores phenotypic information induced by various chimeric repressors in Arabidopsis and six floricultural plants, namely torenia, chrysanthemum, gentian, cyclamen, eustoma, morning glory. Users can find gene constructs that induce their preferred phenotype in Arabidopsis using simple searches, and can browse induced phenotypes in floricultural plants. Most phenotypic information has photo data. FioreDB is continually updated by addition of new data derived from the CRES-T analyses. FioreDB will help to improve traits of horticultural plants using the CRES-T system.
引用
收藏
页码:37 / 43
页数:7
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