Ustiloxin biosynthetic machinery is not compatible between Aspergillus flavus and Ustilaginoidea virens

被引:7
作者
Umemura, Maiko [1 ]
Kuriiwa, Kaoru [1 ,2 ]
Tamano, Koichi [3 ,4 ]
Kawarabayasi, Yutaka [1 ]
机构
[1] Natl Inst Adv Ind Sci & Technol, Bioprod Res Inst, 1-1-1 Higashi, Tsukuba, Ibaraki 3058566, Japan
[2] Natl Museum Nat & Sci, Dept Zool, Ibaraki 3050005, Japan
[3] AIST, Bioprod Res Inst, Toyohira Ku, 2-17-2-1 Tsukisamu Higashi, Sapporo, Hokkaido 0628517, Japan
[4] Waseda Univ, Computat Bio Big Data Open Innovat Lab CBBD OIL, AIST, Shinjuku Ku, 5-20 Bldg 63,Nishi Waseda Campus,3-4-1 Okubo, Tokyo 1698555, Japan
关键词
ribosomally synthesized and posttranslationally; modified peptides (RiPPs); Secondary metabolite; Synthetic machinery; Precursor peptide; Synthetic gene; DUF3328; domain; FALSE SMUT BALLS; NATURAL-PRODUCTS; CYCLIC-PEPTIDES; GENE;
D O I
10.1016/j.fgb.2020.103434
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Ustiloxins are ribosomally synthesized and post-translationally modified peptides (RiPPs) first reported in Ascomycetes. Originally identified as metabolites of the rice pathogenic fungus Ustilaginoidea virens, they were recently identified among the metabolites of the mold Aspergillus flavus, along with their corresponding biosynthetic gene cluster. Ustilaginoidea virens produces ustiloxins A and B, whereas A. flavus produces only ustiloxin B. Correspondingly, in U. virens, the ustiloxin precursor peptide, from which the compound backbone is cleaved and cyclized, contains the core peptides Tyr(Y)-Val(V)-Ile(I)-Gly(G) and Tyr(Y)-Ala(A)-Ile(I)-Gly(G) for ustiloxins A and B, respectively, whereas that of A. flavus contains only the YAIG motif for ustiloxin B. In this study, the gene that encodes the precursor peptide in A. flavus, ustA, was replaced with synthetic genes encoding the core peptides YVIG or FAIG, to investigate their compatibility with the ustiloxin biosynthetic machinery. We also examined the importance of the hydroxyl group on the aromatic ring of Tyr for cyclization of the YAIG core peptide. Against our expectation, the ustA variant possessing YVIG core peptides did not produce a detectable amount of ustiloxin A, even though the ustiloxin biosynthetic gene clusters of A. flavus and U. virens both contain 13 homologous genes. We confirmed that the lack of ustiloxin A production was not due to lack or insufficient expression of the substituted synthetic gene. This result, along with the differences between the primary sequences of UstYa and UstYb in A. flavus and U. virens, suggests that the ustiloxin biosynthetic machinery is optimized for the native core peptide sequences. The synthetic FAIG-encoding ustA did not yield any compounds specific to the FAIG core peptide, suggesting that the hydroxyl group on the aromatic ring of Tyr in the core peptide is indispensable for cyclization of the core peptide, even though it is not structurally involved in the cyclization.
引用
收藏
页数:8
相关论文
共 20 条
[1]   Ribosomally synthesized and post-translationally modified peptide natural products: overview and recommendations for a universal nomenclature [J].
Arnison, Paul G. ;
Bibb, Mervyn J. ;
Bierbaum, Gabriele ;
Bowers, Albert A. ;
Bugni, Tim S. ;
Bulaj, Grzegorz ;
Camarero, Julio A. ;
Campopiano, Dominic J. ;
Challis, Gregory L. ;
Clardy, Jon ;
Cotter, Paul D. ;
Craik, David J. ;
Dawson, Michael ;
Dittmann, Elke ;
Donadio, Stefano ;
Dorrestein, Pieter C. ;
Entian, Karl-Dieter ;
Fischbach, Michael A. ;
Garavelli, John S. ;
Goeransson, Ulf ;
Gruber, Christian W. ;
Haft, Daniel H. ;
Hemscheidt, Thomas K. ;
Hertweck, Christian ;
Hill, Colin ;
Horswill, Alexander R. ;
Jaspars, Marcel ;
Kelly, Wendy L. ;
Klinman, Judith P. ;
Kuipers, Oscar P. ;
Link, A. James ;
Liu, Wen ;
Marahiel, Mohamed A. ;
Mitchell, Douglas A. ;
Moll, Gert N. ;
Moore, Bradley S. ;
Mueller, Rolf ;
Nair, Satish K. ;
Nes, Ingolf F. ;
Norris, Gillian E. ;
Olivera, Baldomero M. ;
Onaka, Hiroyasu ;
Patchett, Mark L. ;
Piel, Joern ;
Reaney, Martin J. T. ;
Rebuffat, Sylvie ;
Ross, R. Paul ;
Sahl, Hans-Georg ;
Schmidt, Eric W. ;
Selsted, Michael E. .
NATURAL PRODUCT REPORTS, 2013, 30 (01) :108-160
[2]   Clustered genes involved in cyclopiazonic acid production are next to the aflatoxin biosynthesis gene cluster in Aspergillus flavus [J].
Chang, Perng-Kuang ;
Horn, Bruce W. ;
Dorner, Joe W. .
FUNGAL GENETICS AND BIOLOGY, 2009, 46 (02) :176-182
[3]   Biosynthetic investigation of phomopsins reveals a widespread pathway for ribosomal natural products in Ascomycetes [J].
Ding, Wei ;
Liu, Wan-Qiu ;
Jia, Youli ;
Li, Yongzhen ;
van der Donk, Wilfred A. ;
Zhang, Qi .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2016, 113 (13) :3521-3526
[4]   NISIN, A PEPTIDE ANTIBIOTIC - CLONING AND SEQUENCING OF THE NISA GENE AND POSTTRANSLATIONAL PROCESSING OF ITS PEPTIDE PRODUCT [J].
KALETTA, C ;
ENTIAN, KD .
JOURNAL OF BACTERIOLOGY, 1989, 171 (03) :1597-1601
[5]   USTILOXINS, ANTIMITOTIC CYCLIC-PEPTIDES FROM FALSE SMUT BALLS ON RICE PANICLES CAUSED BY USTILAGINOIDEA VIRENS [J].
KOISO, Y ;
LI, Y ;
IWASAKI, S ;
HANAOKA, K ;
KOBAYASHI, T ;
SONODA, R ;
FUJITA, Y ;
YAEGASHI, H ;
SATO, Z .
JOURNAL OF ANTIBIOTICS, 1994, 47 (07) :765-773
[6]   USTILOXIN - A PHYTOTOXIN AND A MYCOTOXIN FROM FALSE SMUT BALLS ON RICE PANICLES [J].
KOISO, Y ;
NATORI, M ;
IWASAKI, S ;
SATO, S ;
SONODA, R ;
FUJITA, Y ;
YAEGASHI, H ;
SATO, Z .
TETRAHEDRON LETTERS, 1992, 33 (29) :4157-4160
[7]   Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes [J].
Krogh, A ;
Larsson, B ;
von Heijne, G ;
Sonnhammer, ELL .
JOURNAL OF MOLECULAR BIOLOGY, 2001, 305 (03) :567-580
[8]   The Fungal Genetics Stock Center: a repository for 50 years of fungal genetics research [J].
McCluskey, K. ;
Wiest, A. ;
Plamann, M. .
JOURNAL OF BIOSCIENCES, 2010, 35 (01) :119-126
[9]   Class of cyclic ribosomal peptide synthetic genes in filamentous fungi [J].
Nagano, Nozomi ;
Umemura, Myco ;
Izumikawa, Miho ;
Kawano, Jin ;
Ishii, Tomoko ;
Kikuchi, Moto ;
Tomii, Kentaro ;
Kumagai, Toshitaka ;
Yoshimi, Akira ;
Machida, Masayuki ;
Abe, Keietsu ;
Shin-ya, Kazuo ;
Asai, Kiyoshi .
FUNGAL GENETICS AND BIOLOGY, 2016, 86 :58-70
[10]   Codon usage tabulated from international DNA sequence databases: status for the year 2000 [J].
Nakamura, Y ;
Gojobori, T ;
Ikemura, T .
NUCLEIC ACIDS RESEARCH, 2000, 28 (01) :292-292